Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3266 |
Symbol | |
ID | 5835495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 3622149 |
End bp | 3626867 |
Gene Length | 4719 bp |
Protein Length | 1572 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641369066 |
Product | glutamate synthase (ferredoxin) |
Protein accession | YP_001640724 |
Protein GI | 163852681 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0069] Glutamate synthase domain 2 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.819491 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0774951 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTGAAA TCCCGTCTGA GCTGTCGGTG TCGGTCATGA ACGCCGAGAA AGCCGCGCCG TCGCGCGCCG GTGCCACGCC GCTGATCCTG CGCGACCCGG GCCTTCCCGC GGCCGAAGGC GCCTACAACC CCGCCCACGA GCGCGACGCC TGCGGCGTCG GCTTCGTCGC GGACATGCAC GACCGGCGCA GCCACGCCAT CGTCCAACAG GGTCTCAAGA TCCTGGAGAA CATCGACCAC CGCGGCGCGG TCGGTGCCGA CCCCACCATG GGCGACGGCT GCGGCATCCT CACCCAGATC CCGCACGGCT TCTTCTCGGA GGAATGCTCG CGCCTCGGCT TCGAGCTGCC GCCAGCCGGC CAGTACGCCA TCGGCCAGTT CTTCCTGCCG AAGGCGGAGG AGGCCCGCGC CAGCATCGAG GCGATCGTCG AGAAGACGCT GTCCGACGAG GGCCTGCCGC TGCTCGGTTG GCGCGACGTG CCCGTCGACT CGGCCGATCT CGGCAAGGCC GTGAAGGAGA CCGAGCCGCA TCACCGGCAG GTCTTCATCG GCTGCCCGGC CAGCGTCGCC GATCAGGACG CCTTCGAGCG GCGCGTCTAC ATCGCCCGCA AGGTGATCTC GAACAAGGTC TACGGCCTCG AAGACGAGCG CGTGAAGGCG TTCTATCCCG TCTCCGTGTC GAGCCGGACC ATCGTCTACA AGGGCATGGT GCTCGTGCAC CAGCTCGGCC ACTACTATCT CGACCTGAAG GATCCGCGCT TCGTCTCGGC GCTGGCGCTC GTCCACCAGC GCTTCGCCAC CAACACCTTC CCGACCTGGC GCCTGTCGCA CCCCTACCGG ATGGTCGCGC ATAACGGCGA GATCAACACG CTGCGCGGCA ACGTGAACTG GATGGCCGCG CGTCAGGCCA GCGTCGATTC CGAGCTGTTC GGCAACGACA TCTCGAAGCT CTGGCCGATC TCCTACGAGG GCCAGTCCGA CACCGCCTGC TTCGACAACG CCCTCGAATT CCTCGTGGCC GGCGGCTACT CGCTCGCCCA TGCGATGATG ATGCTGATCC CGGAAGCCTG GGCCGGCAAC CCGCTGATGA GCGAGGAGCG GCGCGCCTTC TACGAGTACC ACGCCGCCCT GATGGAGCCG TGGGACGGCC CGGCCGCCGT CGCCTTCACC GACGGACGCC AGATCGGCGC CACCCTCGAC CGCAACGGCC TGCGCCCCGC CCGCTACATC GTCACCGATG ACGGCCTCGT CGTGCTCGCC TCCGAGATGG GCGTGCTGCC GATCCCCGAC GAGAAGATCG TCCAGTCCTG GCGCCTGCAG CCGGGCCGGA TGCTGCTGAT CGATCTGGAG AAGGGCCGCA TCGTCTCCGA CGAGGAGATC AAGGGCGAGC TGGCCTCCGC GCATCCCTAT GCCGAGTGGG TGAAGAACAC CCAGATCGTG CTGGAGGATC TGCACCCGAT CCAGCCGCGG GCTTCGCGCA CGGACGTGCC CCTGCTCGAT CGCCAGCAGG CCTTCGGCTA CACCCAGGAA GACCTCAAGC TGCTCATGGC CCCCATGGCC GTGACCGGCC AGGAGGCCGT CGGCTCCATG GGCTCGGACA CGCCGCTCTC GGCGCTCTCC GACAAGCCGA AGCTGCTCTA CACCTACTTC AAGCAGAACT TCGCGCAGGT CACCAACCCG CCGATCGACC CGATCCGCGA GGAGGCCGTG ATGAGCCTCG TCTCGTTCAT CGGCCCGCGC CCGAACCTGC TGGACATGGA GGGCGCTTCC CGCCGCAAGC GGCTCGAAGT GCGTCAGCCG ATCCTGACCA ACGGCGACCT CGAGAAGATC CGCTCGATCT CCCACTTCGA GGACCGCTTC GACACCCGCA CGCTCGACAT CACCTACGCG GCCGAGTCCG GCGCGGGGGC GATGGAGGGT GCGCTCGATC GCCTGTGCGA CCGGGCCGAG GTCGCGGTGC GCGGCGGCTA CAACATCATC ATCCTGTCGG ACCGCATGGT CGGGCCGGAC CGCATCCCGA TCCCGGCGCT GCTCGCGACC GCAGCCGTGC ACAACTACCT GATCCGCAAG GGTCTTCGCA CCTCGGTCGG CCTCGTGGTC GAGTCGGGCG AGCCGCGCGA GGTGCATCAC TTCGCCTGTC TGGCCGGCTA CGGCGCGGAG GCGATCAACC CCTATCTCGC CTTCGAGACG CTGATCGCGA TGAAGGGCGA GTTCCCGCCG GACCTGACCG ACGACGAGAT CGTCTACCGC TACATCAAGT CGATCGATAA GGGCCTGCTC AAGGTCATGT CCAAGATGGG CATCTCGACC TACCAGTCCT ATTGCGGCGC GCAGATCTTC GACGCGATCG GCCTGAACTC GGACTTCGTG GCCAAGGACT TCTTCGGCAC GGCGACGACG GTCGAGGGCA TCGGCATGGC CGAGGTCGCT CAGGAAACGA CCCTGCGCCA CCAGGACGCC TTCGGCGACG CCCCGATCTA CCGCAACGCG CTCGATGTCG GCGGCGAGTA CGCCTACCGC CTGCGCGGCG AGACCCACAC CTGGACGCCC GACACCGTGG CGACGCTGCA GCACGCGGTG CGCCTCGGCG CGGCCGAGCG CTACCGCGAA TACGCCCGGT TGGTGAACGA GCAGGAGAAC CACCTCAAGA CCCTGCGCGG CCTGTTCCGG GTCAAGACCG CCGCCGATCT CGGCCGGCAG CCGGTCGACA TCTCGGCGGT CGAGCCGGCC TCCGAGATCG TCAAGCGCTT CGCCACGGGC GCGATGTCCT ACGGGTCGAT CTCGAAGGAG GCGCACGAGA CGCTGGCCAT CGCGATGAAC TCGTTCGGCG GTCGCTCGAA CTCGGGTGAG GGCGGCGAGG AGCCGCGCCG GTTCATAACT GGGCCGGACG GGCGCTCGCG CCGCTCGGCG ATCAAGCAGG TGGCGTCGGG CCGCTTCGGT GTCACCACCG AATATCTCGT CAACGCCGAC ATGATGCAGA TCAAGGTCTC GCAGGGCGCC AAGCCCGGCG AGGGCGGCCA GCTGCCCGGC CACAAGGTCG ATGCCAAGAT CGCCAAGGTC CGCTACGCGA CCCCGGGCGT CGGCCTGATC TCGCCGCCGC CGCACCACGA CATCTACTCG ATCGAGGATC TGGCCCAGCT CATCTTCGAC CTGAAGAACG TGAACCCGGC CGCCGACGTC TCGGTGAAGC TGGTCTCCGA GGTCGGCGTC GGCACGGTCG CCGCGGGCGT CGCCAAGGCG CGCGCGGACC ACATCACGAT CTCGGGCTTC GACGGTGGGA CGGGTGCCGC CCCGCTCACC TCGATCAAGC ATGCGGGCGG TCCCTGGGAG ACGGGTCTGG CCGAGACGCA GCAGACGCTG GTGATGAACG GCCTGCGCGG CCGGGTCGCG CTCCAGGCCG ATGGCGGCAT CCGCACCGGC AAGGACGTGA TGATCGCAGT GCTGCTGGGC GCCGACCAGA TCGGCTTCTC GACCGCGCCG CTGATCGCGG CCGGCTGCAT CATGATGCGC AAGTGCCACC TCAACACCTG CCCCGTAGGT GTCGCCACCC AGGACCCGGT GCTGCGCAAG CGCTTCAAGG GGACCCCTGA ACACGTCATC AACTACTTCT TCTTCGTGGC CGAAGAGCTG CGGGAGCTGA TGGCGGCGAT GGGCTTCACC AAGCTGGAGG ACCTGATCGG CCGCTCCGAC CTCCTCGATA AGCGCGACGC GATCGAGCAC TGGAAGGCCC GCGGCCTCGA CTTCTCGAAG CTGTTCCACC GGCCGAATGT CGGGCCGGAG GTGGCGATCC GTCACGTCGA GACGCAGCAC CACCCGATCG ACACGGTGCT CGACCGCCGC CTGATCGCAG GCGCCGAGAC GGCCATCGAA ACCGGCGAGC CGGTCGTGCT CACCGACGTG ATCCGCAACT CGGATCGCGC GGCGGGCGCC ATGCTCTCCG GAGCCGTGGC CAAGCGCCAT GGCCATGACG GGCTTCCCGA CGACACCATC GTGGTCAAGC TCAACGGCAC CGCCGGGCAG AGCTTCGGCG CGTGGCTCGC CGCGGGCGTC ACCCTCGACC TGACCGGCCA TGGCAACGAC TATGTCGGCA AGGGCCTGTC GGGCGGCAAG CTGATCATCC GTCCGAGCGA CGCGCTGAAG GCGCCCCCCG CCCGTACGAT CATGGCCGGC AACACCGTGC TCTACGGGGC GATCGCGGGC GAGTGCTACA TCCGCGGTGC GGCGGGCGAG CGCTTCGCCG TGCGCAACTC CGGCGCCATC ACCGTGGTCG AGGGCATGGG CGACCATGGC TGCGAGTACA TGACCGGCGG CGTCGTGGTC TCCATCGGCG TGACGGGGCG CAACTTCGCG GCCGGCATGT CTGGCGGCAT CGCCTACGTG CTCGACGAGG ACGGTTCGTT CCGCGACCGC TGCAACCTGT CGATGGTCGA TCTGGAGCCG GTGGAAGAGG AGGACGACCT CATGCGCCGC TTCCACCAGG ACGGCGACCT GGAGACCAAG GGCCGGGTCG ACATCCTCGC AGACATGTCG GGCCACGACG AGGAGCGCCT GTCGCAGCTC CTCACCAACC ACATGAAGTA TACGGGTTCG CCGAAGGCCA AGCAGATCCT CGACGAGTGG GCGGCGTTCC GCACCAAGTT CGTCAAGGTG ATGCCGGTCG AGTACCGTCG GGCGCTGCGC GAGATGGAAA TGGCGCGCAT GCCGGTGGCG GCGGAGTAA
|
Protein sequence | MREIPSELSV SVMNAEKAAP SRAGATPLIL RDPGLPAAEG AYNPAHERDA CGVGFVADMH DRRSHAIVQQ GLKILENIDH RGAVGADPTM GDGCGILTQI PHGFFSEECS RLGFELPPAG QYAIGQFFLP KAEEARASIE AIVEKTLSDE GLPLLGWRDV PVDSADLGKA VKETEPHHRQ VFIGCPASVA DQDAFERRVY IARKVISNKV YGLEDERVKA FYPVSVSSRT IVYKGMVLVH QLGHYYLDLK DPRFVSALAL VHQRFATNTF PTWRLSHPYR MVAHNGEINT LRGNVNWMAA RQASVDSELF GNDISKLWPI SYEGQSDTAC FDNALEFLVA GGYSLAHAMM MLIPEAWAGN PLMSEERRAF YEYHAALMEP WDGPAAVAFT DGRQIGATLD RNGLRPARYI VTDDGLVVLA SEMGVLPIPD EKIVQSWRLQ PGRMLLIDLE KGRIVSDEEI KGELASAHPY AEWVKNTQIV LEDLHPIQPR ASRTDVPLLD RQQAFGYTQE DLKLLMAPMA VTGQEAVGSM GSDTPLSALS DKPKLLYTYF KQNFAQVTNP PIDPIREEAV MSLVSFIGPR PNLLDMEGAS RRKRLEVRQP ILTNGDLEKI RSISHFEDRF DTRTLDITYA AESGAGAMEG ALDRLCDRAE VAVRGGYNII ILSDRMVGPD RIPIPALLAT AAVHNYLIRK GLRTSVGLVV ESGEPREVHH FACLAGYGAE AINPYLAFET LIAMKGEFPP DLTDDEIVYR YIKSIDKGLL KVMSKMGIST YQSYCGAQIF DAIGLNSDFV AKDFFGTATT VEGIGMAEVA QETTLRHQDA FGDAPIYRNA LDVGGEYAYR LRGETHTWTP DTVATLQHAV RLGAAERYRE YARLVNEQEN HLKTLRGLFR VKTAADLGRQ PVDISAVEPA SEIVKRFATG AMSYGSISKE AHETLAIAMN SFGGRSNSGE GGEEPRRFIT GPDGRSRRSA IKQVASGRFG VTTEYLVNAD MMQIKVSQGA KPGEGGQLPG HKVDAKIAKV RYATPGVGLI SPPPHHDIYS IEDLAQLIFD LKNVNPAADV SVKLVSEVGV GTVAAGVAKA RADHITISGF DGGTGAAPLT SIKHAGGPWE TGLAETQQTL VMNGLRGRVA LQADGGIRTG KDVMIAVLLG ADQIGFSTAP LIAAGCIMMR KCHLNTCPVG VATQDPVLRK RFKGTPEHVI NYFFFVAEEL RELMAAMGFT KLEDLIGRSD LLDKRDAIEH WKARGLDFSK LFHRPNVGPE VAIRHVETQH HPIDTVLDRR LIAGAETAIE TGEPVVLTDV IRNSDRAAGA MLSGAVAKRH GHDGLPDDTI VVKLNGTAGQ SFGAWLAAGV TLDLTGHGND YVGKGLSGGK LIIRPSDALK APPARTIMAG NTVLYGAIAG ECYIRGAAGE RFAVRNSGAI TVVEGMGDHG CEYMTGGVVV SIGVTGRNFA AGMSGGIAYV LDEDGSFRDR CNLSMVDLEP VEEEDDLMRR FHQDGDLETK GRVDILADMS GHDEERLSQL LTNHMKYTGS PKAKQILDEW AAFRTKFVKV MPVEYRRALR EMEMARMPVA AE
|
| |