| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3246 |
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| Symbol | |
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| ID | 5835519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 3600696 |
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| End bp | 3604133 |
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| Gene Length | 3438 bp |
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| Protein Length | 1145 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641369046 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_001640704 |
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| Protein GI | 163852661 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00516483 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGAAAAGG TCGTTTCAGT CCGATCCGCA GTCCGCCGTT TCACGCCTTG CGCGAAACGA
TGGTCCGCCG GGCACCGGAA GCCGCCGACT TCGGATCTCC GCGAGATGAA ACAGACTGCC
CCGATCAGCC TCGACAGCTT CGACCCGGAG GTACTCGCGG CTGCCCGCGA GGTCGCCCGG
CGAGCGGGGG TGCCGCTGGA GAGCTGGATC GCCTCGGTGG CGACACCCGA CCCGTCGAAG
CCGGGTCCGC GGCGGCGGCG CGCGGATGCG ACGTCCCCAG CCAGGGAGGC CGGCGCGGAG
CCGGCCCGGC ACGTCGGAGG CCGGGCGCCG GAGAAGGCGC CCACGCCCGC CTCACGGAAG
GACGGGCCAC AGCACAAGCG CCGGGAAGCC ACTCAGGGCG CTTCGGCCGC CGAGGCGTCC
GCAACGACAT CGCTGGAAGC CTCGCTCGGC GCGATGATGC GGCGGCTCGA CGCCCTCGAC
CGCTCGATCA GCGAGGAGCG CGAGGCCTCC AAGGCCGATG CCGCCCGGAT GATCGACGAG
ATCGAGGCGC GGTTGACCAC CGCCCGCCAG CCCGTCGCAC CGGAAATGAT CGCCGGACGC
ATCGCCGACA TCGAACGCAA GATGGGCGAG ATCGCCGGCC AGCTCGACAC GCCCCGCCCG
CTGGGTCGGC GCGGGCGCCC GCTCGCCACC GAGGTCCGCG ATGCCGTCGC CGAGGTGCGC
CGCCGCCAGC GCGAGCTGGA AGAGGGCATC GCCGAGTGGA ACGCCGCCAG CGCGGGAGAA
TTGAAGGACC GGCCGCAGGA TGGCCCGGCC GCACTTGCGG TGACGCCTGC CGAGGAAGGC
TCCGGCCAGG AGCCGTCCCC GGCCATCGCC GAACTGCAAC GCGAGACGAA CCGGCTGCGC
GACGCGCTCG GCAGCCTCGC CACCGGCCGC GACGTCAGCG AGCTGGAGCG GACCATGCAG
GCCGTCGCCA GCGACCTTCA GCGGGCGCGT GCCCCGCAGG AGCTCGCCGC CATCGCCGCC
CCGGTCGAGC TGATGCGCCT CCAAGTGGAG CGGATCGCCG AAGACGTGGC GGACAACGTC
CATGCCCGCA TCGCGGGTGA GGTCGAGCGC TTGGCCGGGA AGGTGGATGC CGTTCTCTCC
GGCGTCTTGT CCGGCCCCGC CGACCAGAGC GCCCTCGACG GCGTGTTCCG CGAACTCGAC
GAGATCCGCC GCCTCGTGGC GTCCCTGGCA GGGCCGGAGC GCATCCAGAG CCTCGCCCAG
GGCGTGCAGG CAATCAGCGC CCAGATCACC CAGCTTCAGC GGGACGAGGA TGCGGGTATC
GCCACCCTCA AGCCGCTGCT GGAGGAGATC CGCGGCGAAC TGAAGGCGCC CGATTCATCT
CGCGAGCTTC CCGGCGCGCT TCTCGGACGT TTCGAAGCGC TCGCGCAGCG GCTCGATGGC
GCCGAGTCCG GCTCCGTCGG CGAGCTGATC GAGCGGCTCG AAGGCGTGGC TGAAAAAGTC
GACCGCGTCA GCGCGGGCGG CAGCGGGCTC GATGCCCTGG AGCGCCACGT CCTCGCCCTG
GCGAGCCGGC TCGAAGCGCC GCGCGACACC GATCCGGCCG TGGCGCGCCT CGAGCGCTCC
ATGGGCGACC TGCTCGCCCA GGTCACGGCC CTGCGCAACG GAACCGATCT GGAGGCCACC
GTCGCGCAGG CGGTCCGTGA GGCCGTGGCG GGCTCGACCG CCCCGCTCGC GGCCGGCGGC
GGTTTCGAGC TGCTGCGGGC CGATCTCGCC GAGATGCGGG CCAACCAGAA GGGCGCGGAC
CAGCGCCTCC AATCGACGAT GGAAGGCGTC CAGTCGGTGC TGATGCGGCT GAGCGAGCAG
CTCGACCGCA CCATGACCTC GTCCGCGGCC CTCACCGCCG CCGCCCCGCA GGAGCGCGCG
CCCGTCGTGC TGTCCTCGGC CGAGCGCGTC TCGCACGAGC GCCCCGCCGC CCCGAAGACG
GCTGCCAAGC CGTCATCCGA GCCGTCGTCC CAGAACCTTG CCCGCCCGAA CCGCACCGCA
TCCTCCGACG AGGCCGGCGG GACGGAGGCG AGCCGCCTGT CCGACGAGTT GCTGGAGCCC
GGTGCCGGCC GGCCCGGATC CGGCCGCCCG GCCGCGCCGG AGGCGAGCCC CGCCGCGACC
GGCGGCGCCG ACATCAAGAC CAGCTTCATC GCCGCCGCGC GGCGCGCGGC GCAGGCCGCG
CAGGCCGAAT CGGCCACCGA GGCGCCACTG ACGGCGCGGC TGCGCGACAA GGTCGCTCCG
GCCCGCATGC CGGGCGCGGA GACGACGCCC CTCTCGCGGA TCCGCGGTGC CCTCGACAGC
CGCCGCCGCA CGCTCCTGCT CGGCCTTGCC GCTGTGGTGC TGGCGCTCGG CGCCTACCAA
GCCTTCGTCG CGGGCAAGGG CACTCCGACC GGAACTCCGA CCGGCGACCC GGCCGCGCCG
GAGGCTCGTC CGGTGGCGAG CACCGCCCCG GCGGCCTCCG CCGACGTCGC CGCGAGCCGC
ACCGAGACCA CGGCCGAGCC CGCTCAGGCG GCGTCGCAGA CCCAGGCTCC GTCCGAGACT
TCCCCCCAGA CCGGGACATC CGCCCAGACG ACGCCCGACC CGGCGACGAC CCAATCCATC
GCCGAGCCGA AATCCGCGCC GGCCAAGCGC GGGCTGCCCC AGGTCGCGGG CATGAGCACG
CTCGGCCCCG ACCTTGCCGG CCTGCCGCCG GCCCTGGCCA AGCTCAAGCA GGATGCGCTC
GACGGCGACG GCGCCGCGGT CTGGGAGATC GCCTCCCGCG AGGCCGAAGG CCGGGGCGTG
ACGCGCGACC TCGTGGTCGC CGCCAAGCTC TACGAGCGGC TCGCGAATGC CGGCTACGCG
CCGGCTCAGT TCAAGGTCGG CAACGCCTAC GAAAAGGGCT CGGGCGTGGT CCGGGACATC
GAGAAGGCGA AGGCGTGGTA CGGCCGCGCC GCGGATCAGG GCAACATCCG CGCGATGCAC
AACCTCGCCG TGCTGCATGC CGAGAACCCG GCGGCCAACG GCAAAGCGGA TTTCGTGACC
GCCGCGAACG CCTTCCGCCG GGCGGCGGAA CACGGGGTGC GCGACAGCCA GTACAACCTG
GCCGTACTCT ACGCCCGCGG TCTCGGCGTC GGACAGGATC TCGTCCAGTC CTATCTCTGG
TTCTCGGCCG CTGCCACGCA GGGGGACCAG GAAGCGGGCC GCAAGCGGGA CGAGGTCGCC
GCCAAGCTCT CGCCGAAGGA TCTCACCGAA GCCAGGAGCC TCGCAGCGGG CTTCAAGGCG
AAGGCCGTCG ATCCGGCCGC GAACGAGGCC CCGTCCCAGA AGGCTACCGC CGCAGCGGGG
ATGTCTCTGA TGGGCGCGCC GTCGCCGGGC ATGCCGACCG CCGCTTCCCC ATCGGCGCAG
AAGCGGTTCG GGGTCTGA
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| Protein sequence | MEKVVSVRSA VRRFTPCAKR WSAGHRKPPT SDLREMKQTA PISLDSFDPE VLAAAREVAR
RAGVPLESWI ASVATPDPSK PGPRRRRADA TSPAREAGAE PARHVGGRAP EKAPTPASRK
DGPQHKRREA TQGASAAEAS ATTSLEASLG AMMRRLDALD RSISEEREAS KADAARMIDE
IEARLTTARQ PVAPEMIAGR IADIERKMGE IAGQLDTPRP LGRRGRPLAT EVRDAVAEVR
RRQRELEEGI AEWNAASAGE LKDRPQDGPA ALAVTPAEEG SGQEPSPAIA ELQRETNRLR
DALGSLATGR DVSELERTMQ AVASDLQRAR APQELAAIAA PVELMRLQVE RIAEDVADNV
HARIAGEVER LAGKVDAVLS GVLSGPADQS ALDGVFRELD EIRRLVASLA GPERIQSLAQ
GVQAISAQIT QLQRDEDAGI ATLKPLLEEI RGELKAPDSS RELPGALLGR FEALAQRLDG
AESGSVGELI ERLEGVAEKV DRVSAGGSGL DALERHVLAL ASRLEAPRDT DPAVARLERS
MGDLLAQVTA LRNGTDLEAT VAQAVREAVA GSTAPLAAGG GFELLRADLA EMRANQKGAD
QRLQSTMEGV QSVLMRLSEQ LDRTMTSSAA LTAAAPQERA PVVLSSAERV SHERPAAPKT
AAKPSSEPSS QNLARPNRTA SSDEAGGTEA SRLSDELLEP GAGRPGSGRP AAPEASPAAT
GGADIKTSFI AAARRAAQAA QAESATEAPL TARLRDKVAP ARMPGAETTP LSRIRGALDS
RRRTLLLGLA AVVLALGAYQ AFVAGKGTPT GTPTGDPAAP EARPVASTAP AASADVAASR
TETTAEPAQA ASQTQAPSET SPQTGTSAQT TPDPATTQSI AEPKSAPAKR GLPQVAGMST
LGPDLAGLPP ALAKLKQDAL DGDGAAVWEI ASREAEGRGV TRDLVVAAKL YERLANAGYA
PAQFKVGNAY EKGSGVVRDI EKAKAWYGRA ADQGNIRAMH NLAVLHAENP AANGKADFVT
AANAFRRAAE HGVRDSQYNL AVLYARGLGV GQDLVQSYLW FSAAATQGDQ EAGRKRDEVA
AKLSPKDLTE ARSLAAGFKA KAVDPAANEA PSQKATAAAG MSLMGAPSPG MPTAASPSAQ
KRFGV
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