Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3241 |
Symbol | |
ID | 5835414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 3593484 |
End bp | 3595685 |
Gene Length | 2202 bp |
Protein Length | 733 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641369041 |
Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
Protein accession | YP_001640699 |
Protein GI | 163852656 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.736069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0839806 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCAA CCGAGAATTT CCGCTTCGAG ACCGATGCCA ACGGCATCGC GCTCGCGACC TGGGACATGC CGGGCCGTTC GATGAACGTC ATCACCATGG AGGTGATGGC GGAGCTGGAG CGGATCGTCG ACGCGGTCGT CGCCGACGAG GCCATCAAGG GCTGCGTCAT CGTCTCGGGG AAGAACAACT TCTCCGGCGG CGCCGACCTC ACCATGCTCC AGGGCCTCGG GGTCGAGTAC GAGCGGCTGA AGGCGAGTGA GGGCGAGGAG GTGGCCATGC GCCACTTCTT CGAGGAATCG CGGCGCCTCA GCCTCGTGTT CCGCAAGCTC GAGACCTGCG GCAAGCCGTT CGCGGCGGCG GTGCACGGCC TGTGCCTCGG CGGCGCTTTC GAGCTCGCGC TGGCCTGCCA CCACCGGGTG CTCGCCGACG ACGACAAGAC CCGCGTCGGC CTGCCCGAGA TCAAGGTTGG CCTGTTTCCC GGCGGCGGCG GCACGCAGCG CGTGTCCCGT TTGATGCAGA CCGGCGACGC GCTGCAGATG CTGTTCAAGG GCGAGCAGAT CCGCGCGCTC ATGGCCAAGA ACATGGGGCT GGCCCACGCC GTCGCCCCGG CCGCGGAGAT CGTCGAGCGG GCCAAGGCCT GGATCCGCGA GGGCGGCTCG GCGGTGGCAC CGTGGGACGT GCCGAAGTTC AAGGCGCCGT CCGGAAAGGT CTACTCGCCC GCCGGCATGA TGATCTGGCC GCCGGCCAAC GCGATCTACC GCCGCGAAAC CCACGACAAT TACCCGGCCG CCAAGGCGAT CCTGGCCTCG GTCTACGAGG GCCTGCAACT GCCGATGGAT CTCGGCCTCC GGGTCGAGAG CCGCTACTTC GCCCATATCC TGCGCACCAA GGAAGCGCAG GCGATGATCC GCACCCTGTT CATCTCCATG GGTGAGATCA ACAAGGGCGC CCGCCGCCCG AAGGACGTCG AGGCGACCAA GGTCGGCAAG GTTGGCGTCA TCGGCGCCGG CTTCATGGGC GCGGGCATAG CCTACGTCAC GGCGCAGGCC GGGATGGAGG TCGTGCTGAT CGACCGCGAT CAGGAGGCGG CCGATGCCGG CAAGGCGCAT TGCCATAAGC TCATCACCGG CCAGATCAAC CGCGGCAAGG CCAAGACCGC CGACCGCGAC GCCCTGCTCG CCCGCATCAC CGCCACGCCC GATTACGGCG CCCTGTCCGA TTGCGACCTC GTGATCGAGG CGGTGTTCGA GGACCCGAAG GTCAAGGCCG AGGTGATCGC CAAGGTCGAG GCGGCGCTGC CGGCGCACGC AATCTTCGCC TCCAACACCT CGACCCTGCC GATCTCCGGC CTCGCCCAGA CCTCGAAGCG GCCCGAGCAG TTCGTCGGCA TCCACTTCTT CTCGCCGGTG GAGAAGATGC TGCTCGTGGA GATCATCCGC GGCAACCAGA CCGGCGACCG CGCGGTCGCC ACCGCCCTCG ACTACGTGCG CGCGATCAAG AAGACCGGCA TCGTCGTCAA CGATTCCCGC GGCTTCTTCG CCAACCGCTG CGTGCTCGCC TACATCCATG AGGGCCACAA GATGCTCACC GAGGGCGTGC CCCCGGCGAT GATCGAGAAC GTGGCGCGGA TGGCCGGCAT GCCGGTCGGC CCGCTCTCGC TCAACGACGA GGTGGCGCTC GATCTCGGCC TCAAGATCAT GCGGGCGACC GAGGCGCAGC TCGGCGAGGG CGCCGTCGAT CCGGACCAGA AGCGGCTCCT CGTCGCGATG GTCGAGACGC ATGGCCGGCT CGGGCGCAAG AACAAGCGCG GCTTCTACGA CTACCCCGAG GGCGGCCAGA AGACGCTCTG GCCGGGGCTC GCCGAGATCC AGCCGAACCG GCTCGACCCG GAAGGCATCG ACATCGACGA GCTGAAGCAC CGCTTCCTCG TGGTGCAGGC GCTGGAGGCC GCCCGCACGA TGCAGGAGGG CGTGGTGACC GATCCGCGCG AGGCGGATGT CGGCTCGATC CTCGGCTTCG GCTTCGCCCC GTTCACCGGC GGCGCGCTCT CCTACATCGA CTTCATGGGC GCGAAGGCCT TCGTGGCGCT GGCCCGGCAG TTGGAGGCCC GGCACGGCGC CCGCTTCACC CCGCCGGACA ACCTCCTGGC GATGGCCGAA TCCGGGGCGC GCTTCTACGA CGCGCTGAAG CAGGCGGCGT AA
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Protein sequence | MTATENFRFE TDANGIALAT WDMPGRSMNV ITMEVMAELE RIVDAVVADE AIKGCVIVSG KNNFSGGADL TMLQGLGVEY ERLKASEGEE VAMRHFFEES RRLSLVFRKL ETCGKPFAAA VHGLCLGGAF ELALACHHRV LADDDKTRVG LPEIKVGLFP GGGGTQRVSR LMQTGDALQM LFKGEQIRAL MAKNMGLAHA VAPAAEIVER AKAWIREGGS AVAPWDVPKF KAPSGKVYSP AGMMIWPPAN AIYRRETHDN YPAAKAILAS VYEGLQLPMD LGLRVESRYF AHILRTKEAQ AMIRTLFISM GEINKGARRP KDVEATKVGK VGVIGAGFMG AGIAYVTAQA GMEVVLIDRD QEAADAGKAH CHKLITGQIN RGKAKTADRD ALLARITATP DYGALSDCDL VIEAVFEDPK VKAEVIAKVE AALPAHAIFA SNTSTLPISG LAQTSKRPEQ FVGIHFFSPV EKMLLVEIIR GNQTGDRAVA TALDYVRAIK KTGIVVNDSR GFFANRCVLA YIHEGHKMLT EGVPPAMIEN VARMAGMPVG PLSLNDEVAL DLGLKIMRAT EAQLGEGAVD PDQKRLLVAM VETHGRLGRK NKRGFYDYPE GGQKTLWPGL AEIQPNRLDP EGIDIDELKH RFLVVQALEA ARTMQEGVVT DPREADVGSI LGFGFAPFTG GALSYIDFMG AKAFVALARQ LEARHGARFT PPDNLLAMAE SGARFYDALK QAA
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