Gene Mext_3231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3231 
Symbol 
ID5835494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3585808 
End bp3586515 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content71% 
IMG OID641369031 
Productheat shock protein DnaJ domain-containing protein 
Protein accessionYP_001640689 
Protein GI163852646 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.443347 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTCA ACTCGCCGCT GTTCGACCGC ATCCGTATCA AGCCGACCTG TGACGATCCC 
AAGCCGGGAG CGAAGGCGGG GGCGAAGGCC GGCGCACGCG CGAAGGCCGG TGCGGCCACG
GCCGAGGCGT CCTGCGAGGC GGAAGGCTGC ACCCATCCCG GCCTCTACCG CGCCCCCAAG
GGCCGCAGGC AGGAGGGGCA GTACTGGCGC TTCTGCATCG ACCACGTGCG CGCCTACAAC
GCCTCCTACA ATTACTTCGA CGGCATGAAC GATGCCGCGG TCGAAGCCTA TCAGAAGGAT
GCGATCATCG GTCATCGGCC GACATGGTCG ATGGGCATGA ACGCGGCGGC CGCCACGGCC
GAGGGAAAGG CCAAGGGGGC CAAGGGGCCC CAGCCCGAGG CTGAGCGCGA CTGGGCCTAT
GCCGACCCGC TGGGAATCCT GCGGGCGAAC GGGGTCGGCG GCGGGGCGGC CGGCCGGCGT
CAGGCCGAGC CGGAGCCGCA GCGTCCCCGC CACTCGGCGG CGGTGCGCAA GGCGCTCGAC
GTGATGGGGC TCGACGAGAC GGCCGACACC GCGGCGATCA AGGCGCAGTA CAAGACGCTG
GTGAAGCGCT TCCACCCGGA CGCCAATGGC GGCGACCGCT CCTTCGAGGA GCGCCTGCGC
GACATCATCC GCGCTCACGA CGTGCTGCGC GCCGCCGGTC TGTGCTGA
 
Protein sequence
MDLNSPLFDR IRIKPTCDDP KPGAKAGAKA GARAKAGAAT AEASCEAEGC THPGLYRAPK 
GRRQEGQYWR FCIDHVRAYN ASYNYFDGMN DAAVEAYQKD AIIGHRPTWS MGMNAAAATA
EGKAKGAKGP QPEAERDWAY ADPLGILRAN GVGGGAAGRR QAEPEPQRPR HSAAVRKALD
VMGLDETADT AAIKAQYKTL VKRFHPDANG GDRSFEERLR DIIRAHDVLR AAGLC