Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3229 |
Symbol | |
ID | 5835492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 3582457 |
End bp | 3584364 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641369029 |
Product | cobalt chelatase, pCobT subunit |
Protein accession | YP_001640687 |
Protein GI | 163852644 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4547] Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) |
TIGRFAM ID | [TIGR01651] cobaltochelatase, CobT subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.754717 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCCTGA CCAACCGCCC CAAGACCGGC GACCGCAAGG AGCCCGGCGC CGAGCCGCTG AAGCGCTCGG TGGCCGGCTG CCTGCGCGCC ATCGCCAAGC GGCCCGACAT CGAGGTCACC TATGCCAGCG ATCGGCCGGC GCTGATCGGC GACAAGGCGC GCCTGCCGGA GCCCACCCGG CGGATCACCG CCGAGGACGC GGCGATCCTG CGCGGGCATT CCGATTCCAT GGCCCTGCGC CTCGGCTGCC ATGACACCAG CGTCCATCGC CGCCTCGCCC CCGACAACGC AGCCGCCCGC GCGGTCTACG ATGCGGTCGA GCAGGCGCGC GTCGAGGCGA TCGGCTCGCG CCGCCTTGAA GGCGTGGCCG CCAACATCAC CGCGATGCTG GAGGACCGCT ACCACCGCGG CGGCAAGTAC GAGAACATCA CCGACCGGGC CGACGCGCCG ATGGAGGATG CCGTCGCGCT GATGGTGCGC GAGCGCCTCA CCGGCCAGAA GCCGCCGCCC GCCGCGGCCC GGATCGTCGA GCTGTGGCGC GAGCATATCG AGGCCCGCGC CGGCAAGAAC CTCGACGGAT TGCTCGGCTC GCTCGAGAAC CAGCGCCACT TCGCCCGCTC CGTGCGCGAC CTCCTCTCGT CCCTCGACAT GGCCGACGAG ACGCCCCTCG ATCAGGACGA CGAGAGCGAC GAGGACGAGA ACCAGGCCCA GGACGACGAG CAGCAGCCGA GCGAAGGCGA GGCGGAGGAG CAGAGCCAGG GCGACCGCGC CGAGATCGAG GTGACCGACG AGGCCACCGA CGAACTCGAC GAGGGCGCCA CCGAATCCGC CGACGCCCCC TCCGGCGAGC TGCCGGAGGA AGCTGAGGAC GCCGAGTCGG AGGAGGCCTC CGAATCCTGG CGCCCGCCGA GCCAGCGCGG CAACGAGCGC ACCGGTCCCG ACTACAAGGT CTACAACCCG CGCTTCGACG AGACCGTCGA GGCCGAGGAT CTGTGCGACG CCGAGGAACT TGCGCGCCTG CGCAGCTATC TCGACAAGCA GCTCGCCCAC CTTCAGGGCG TCGTCGGCCG CCTCGCCAAC CGTCTCCAGC GCCGCCTGCT GGCGCAGCAG AGCCGCGCCT GGGATTTCGA TCTCGAAGAG GGCCAGCTCG ATCCGGCTCG CCTCGTTCGC GTCGTCACCG ATCCGTTCCA GCCGCTCTCC TTCAAGCAGG AGAAGGACAC CGACTTCCGC GACACCGTGG TCACGCTGCT GCTCGACAAT TCCGGTTCGA TGCGTGGGCG CCCGATCACC GTGGCCGCGA CCTGCGCCGA CATTCTCGCG CGTACGCTGG AACGCTGCGG CGTGAAGGTC GAGATTCTCG GCTTCACCAC CCGCGCCTGG AAGGGCGGCC AGTCCCGCGA GGCGTGGCTC GCCGGCGGCA AGCCGCCCGC CCCCGGCCGC CTCAACGACC TGCGCCATAT CATCTACAAG AGCGCCGACG CCCCCTGGCG CCGCGCGCGC AAGAACCTCG GGCTGATGAT GCGCGAGGGG CTCTTGAAGG AGAACATCGA CGGCGAGGCG CTGGATTGGG CCCACAAGCG CCTGCTGGCG CGGCCCGAGC AGCGCCGCAT CCTGATGGTG ATTTCCGACG GGGCGCCGGT CGACGATTCG ACGCTCTCGG TCAATCCCGG CAACTACCTC GAGCGCCACC TGCGCTACAT GATCGAGGAG ATCGAGACCC GCTCACCGGT CGAATTACTC GCCATCGGCA TCGGCCACGA CGTGACGCGC TACTACCGCC GTGCCGTGAC GATCATCGAC GCCGAGGAAC TCGGCGGCGC GATGACGGAA AAGCTCGCCG AGCTGTTCGA GGAGAACACG GGCGCGTCGC GCGGCGGCGG GATGAAGCGG GTGGCCGGGC GGCGCTGA
|
Protein sequence | MALTNRPKTG DRKEPGAEPL KRSVAGCLRA IAKRPDIEVT YASDRPALIG DKARLPEPTR RITAEDAAIL RGHSDSMALR LGCHDTSVHR RLAPDNAAAR AVYDAVEQAR VEAIGSRRLE GVAANITAML EDRYHRGGKY ENITDRADAP MEDAVALMVR ERLTGQKPPP AAARIVELWR EHIEARAGKN LDGLLGSLEN QRHFARSVRD LLSSLDMADE TPLDQDDESD EDENQAQDDE QQPSEGEAEE QSQGDRAEIE VTDEATDELD EGATESADAP SGELPEEAED AESEEASESW RPPSQRGNER TGPDYKVYNP RFDETVEAED LCDAEELARL RSYLDKQLAH LQGVVGRLAN RLQRRLLAQQ SRAWDFDLEE GQLDPARLVR VVTDPFQPLS FKQEKDTDFR DTVVTLLLDN SGSMRGRPIT VAATCADILA RTLERCGVKV EILGFTTRAW KGGQSREAWL AGGKPPAPGR LNDLRHIIYK SADAPWRRAR KNLGLMMREG LLKENIDGEA LDWAHKRLLA RPEQRRILMV ISDGAPVDDS TLSVNPGNYL ERHLRYMIEE IETRSPVELL AIGIGHDVTR YYRRAVTIID AEELGGAMTE KLAELFEENT GASRGGGMKR VAGRR
|
| |