Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3224 |
Symbol | |
ID | 5835537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 3578107 |
End bp | 3578787 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641369024 |
Product | electron transport protein SCO1/SenC |
Protein accession | YP_001640682 |
Protein GI | 163852639 |
COG category | [R] General function prediction only |
COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.533734 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTGTG CCGGGCCCTT TCCATGCGGC CGCCGCGCCC GTCGGGCCGC CGCCACAGAC ACGCCTTCGA GGGCTCCCAT GCGTTCCCCC ATGCGTCCGT CCCGCAGCGT TCTCCTGCCG CTTGCCGCCT TCGTGGCCGG GCTCGTGGCA ATCTCCGTCG CGCTGGTGAT GACGCTGGTG CCGCAGCATC CGCAGAGCGG CCCGAGCGGC ATCGGTGGTC CCTTCACCCT GGTGAACCAG GACGGCGCGA CGGTCAGCGA GCGCGATTTT GCCGGCAAGC CCTACCTGAT GTTCTTCGGC TTTACCCATT GCCCCGATGT CTGCCCGACC ACGCTCCAGC AGATCAGCGA CGTGCTGGCG GCGCTCGGCC CCAAGGCGGA TAGGCTGAAG GTCGCCTTCG TTAGCGTCGA CCCTGAGCGC GACACGCCCG CTTCGCTGAA GACCTACCTG TCGAGCTTCG ACCCGCGCAT CGTCGGCCTC ACCGGCAGCC CGGAGCAGGT GGCGGCGACC GTCAAGACCT TCCGCGCCTA CGCCAAGAAG GTGCCGGGTT CGAGCGGCGA CTACACGATG GAGCACACCG CGCTCGTCTA CCTGATGGAC GCCCGCAACG GCTTCGTCGG CGCGGTCAAC CTCAACCGGC CGGCAGCGGA GACGGCAGCG GAGCTGTCGA AGCGGATCTG A
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Protein sequence | MPCAGPFPCG RRARRAAATD TPSRAPMRSP MRPSRSVLLP LAAFVAGLVA ISVALVMTLV PQHPQSGPSG IGGPFTLVNQ DGATVSERDF AGKPYLMFFG FTHCPDVCPT TLQQISDVLA ALGPKADRLK VAFVSVDPER DTPASLKTYL SSFDPRIVGL TGSPEQVAAT VKTFRAYAKK VPGSSGDYTM EHTALVYLMD ARNGFVGAVN LNRPAAETAA ELSKRI
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