Gene Mext_3224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3224 
Symbol 
ID5835537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3578107 
End bp3578787 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content69% 
IMG OID641369024 
Productelectron transport protein SCO1/SenC 
Protein accessionYP_001640682 
Protein GI163852639 
COG category[R] General function prediction only 
COG ID[COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.533734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTGTG CCGGGCCCTT TCCATGCGGC CGCCGCGCCC GTCGGGCCGC CGCCACAGAC 
ACGCCTTCGA GGGCTCCCAT GCGTTCCCCC ATGCGTCCGT CCCGCAGCGT TCTCCTGCCG
CTTGCCGCCT TCGTGGCCGG GCTCGTGGCA ATCTCCGTCG CGCTGGTGAT GACGCTGGTG
CCGCAGCATC CGCAGAGCGG CCCGAGCGGC ATCGGTGGTC CCTTCACCCT GGTGAACCAG
GACGGCGCGA CGGTCAGCGA GCGCGATTTT GCCGGCAAGC CCTACCTGAT GTTCTTCGGC
TTTACCCATT GCCCCGATGT CTGCCCGACC ACGCTCCAGC AGATCAGCGA CGTGCTGGCG
GCGCTCGGCC CCAAGGCGGA TAGGCTGAAG GTCGCCTTCG TTAGCGTCGA CCCTGAGCGC
GACACGCCCG CTTCGCTGAA GACCTACCTG TCGAGCTTCG ACCCGCGCAT CGTCGGCCTC
ACCGGCAGCC CGGAGCAGGT GGCGGCGACC GTCAAGACCT TCCGCGCCTA CGCCAAGAAG
GTGCCGGGTT CGAGCGGCGA CTACACGATG GAGCACACCG CGCTCGTCTA CCTGATGGAC
GCCCGCAACG GCTTCGTCGG CGCGGTCAAC CTCAACCGGC CGGCAGCGGA GACGGCAGCG
GAGCTGTCGA AGCGGATCTG A
 
Protein sequence
MPCAGPFPCG RRARRAAATD TPSRAPMRSP MRPSRSVLLP LAAFVAGLVA ISVALVMTLV 
PQHPQSGPSG IGGPFTLVNQ DGATVSERDF AGKPYLMFFG FTHCPDVCPT TLQQISDVLA
ALGPKADRLK VAFVSVDPER DTPASLKTYL SSFDPRIVGL TGSPEQVAAT VKTFRAYAKK
VPGSSGDYTM EHTALVYLMD ARNGFVGAVN LNRPAAETAA ELSKRI