Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3171 |
Symbol | glyA |
ID | 5831116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 3521633 |
End bp | 3522937 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641368971 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_001640629 |
Protein GI | 163852586 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.188905 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCG GAACTGCGAC CGACACCACC GACCTCGACT CCTTCTTCTC GGCTCATCTT GCCGAGACCG ATCCCGAGAT CGCCAAGGCC ATCTCGCAGG AGCTGGGCCG GCAGCAGCAC GAGATCGAGC TGATCGCGTC CGAGAACATC GTCTCGCGCG CCGTGCTCGA AGCGCAGGGC TCGGTCCTGA CCAACAAGTA CGCCGAGGGC TATCCGGGCC GGCGCTACTA CGGCGGCTGC CAGTTCGTGG ACATCGCCGA GGAACTCGCC ATTGACCGGG CCAAGCGCCT GTTCGGCTGC GGCTTCGCCA ACGTGCAGCC GAATTCCGGC TCGCAGGCGA ACCAGGGCGT GTTCATGGCC CTGATGCAGC CCGGCGACAC CTTCCTCGGC CTCGACCTCG CGGCTGGCGG CCACCTCACC CACGGCGCCC CCCCGAACGT CTCGGGCAAG TGGTTCAAGC CGGTCTCCTA CACCGTGCGC CGCGAGGACC AGCGCATCGA CATGGAGCAG GTCGAGCGTC TCGCCCAGGA GCACAAGCCG AAGGTGATCA TCGCCGGCGG CTCGGGCTAC CCGCGTCACT GGGACTTCGC GAAGTTCCGT GAGATCGCCG ATTCCGTCGG CGCCTACTTC TTCGTCGACA TGGCCCACTT CGCCGGCCTC GTCGCCGCGG GCCTGCACCC GTCGCCGTTC CCGCACGCGC ACGTCGCCAC CACGACGACG CACAAGACCC TGCGCGGCCC GCGCGGCGGC ATGATCCTGA CGAACGACGA GGCGCTGGCC AAGAAGTTCA ACTCGGCGAT CTTCCCCGGC CTCCAGGGCG GCCCGCTGAT GCACGTCATC GCCGCCAAGG CGGTGGCCTT CGGCGAGGCC CTGAAGCCCG AGTTCAAGAT CTACGCCAAG CAGGTGATCG ACAACGCCCG CGCGCTGGCC GACACCATCA TCTCCGGCGG CTACGACATC ACCTCGGGCG GTACCGACAA CCACCTGATG CTGGTCGACC TTCAGAAGAA GGGCCTGACC GGCAAGGCGG CCGAGGCGGC GCTCTCCCGG GCCGACATCA CCTGCAACAA GAACGGCGTG CCGTTCGACC CGCAGAAGCC GACGATCACC TCCGGCATCC GTCTCGGCAC CCCGGCCAGC ACCACCCGCG GCTTCGGCGT CGCCGAGTTC AAGCAGGTCG GCTCGCTGAT CGTTCAGGTG CTCGATGGCA TCGCCGAGAA GGGCGATGGC GGCGACGCGG CGGTCGAGGC GGCGGTGAAG GAGAAGGTCC ACGCCCTCAC CGATCGGTTC CCGATCTACG CCTGA
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Protein sequence | MSAGTATDTT DLDSFFSAHL AETDPEIAKA ISQELGRQQH EIELIASENI VSRAVLEAQG SVLTNKYAEG YPGRRYYGGC QFVDIAEELA IDRAKRLFGC GFANVQPNSG SQANQGVFMA LMQPGDTFLG LDLAAGGHLT HGAPPNVSGK WFKPVSYTVR REDQRIDMEQ VERLAQEHKP KVIIAGGSGY PRHWDFAKFR EIADSVGAYF FVDMAHFAGL VAAGLHPSPF PHAHVATTTT HKTLRGPRGG MILTNDEALA KKFNSAIFPG LQGGPLMHVI AAKAVAFGEA LKPEFKIYAK QVIDNARALA DTIISGGYDI TSGGTDNHLM LVDLQKKGLT GKAAEAALSR ADITCNKNGV PFDPQKPTIT SGIRLGTPAS TTRGFGVAEF KQVGSLIVQV LDGIAEKGDG GDAAVEAAVK EKVHALTDRF PIYA
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