| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3168 |
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| Symbol | |
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| ID | 5831113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 3519178 |
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| End bp | 3520293 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641368969 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_001640627 |
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| Protein GI | 163852584 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.500124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACCTGT CCGAGCAGCA AGCCCTCGAC CGGCGCGCCA TGCGCCTCGC CCTCGCCCTG
GGGCGGCGTA ATCTCGGCCG GACCTGGCCG AATCCGAGCG TCGGCGCCGT CGTCGTTGCC
GAGGGCCGCA TCGTCGGGCA GGCGGTGACG GCGGTCGGCG GTCGCCCGCA CGCGGAGCCG
CTGGCGCTCG CCATGGCCGG TGAGGCCGCG CACGGGGCCA CGCTCTACGT CACCCTCGAG
CCCTGCTCAC ATCACGGCCG CACGCCGCCC TGCACCGACG CGACCATCGC CGCCGGAATC
GCCCGCGTGG TCACCGCGAT CGAGGATCCC GATCCGCGGG TGGCCGGGCG CGGCCATGCG
GGTTTGCGCG CGGCCGGGAT CACGGTGGAA ACCGGCCTGC TGCGCGAGGA GGCCGCCCGC
GATCATCGTG GCCATTTCTC CCGCGTGACG CGTGGGCGCC CGAGCCTGCA TCTCAAGCTC
GCCCGGACCC GCGACGGCTT CGCCGCGCCC TCGACCGGCG AGCGCCTGAA GATCACAGGT
TCGGTCGCGG ACGGCGCGGT GCATCTGTGG CGGGCGCATG CCGACGCGAT CATGGTCGGA
ATCGGCACGG CTCGCGCCGA CGACCCTTCG CTGACCGTCC GGCTTCCGGG GCTCGCCGAG
CGCTCGCCCC TGCGGATCGT GCTCGACTCG ACATTGCGCC TCAACCCCGC CAGCCACCTC
GTGCGCGGGG CCCGCGACCT GCCGACCCTG GTTCTGACCG GGCGCGGCGC CCCGGCCCAT
GCCCGGCGGA TGCTCGCCTC CTTCGGCGTC GAGATCGCCT TCGTTCCGAT CGACGCGGCG
GGCCGCATAG ACTTACCCGC CGCGCTGAAA GCGCTGGCGG AGCGCGGCCT GACCCGGATC
TGCAGCGAGG GCGGGCCGGC GCTTGCCGAC GCGCTCGCGG CGCACGATCT CATCGATGCC
TGCACGCTCA TCACCGGCTC CGTTACGCTG GGCGAGGCCG GCGGCTTGCC GGCGCTCGGG
GCCAACCTCG CCCGCCGCCT CGCCGACGGC TTGCTGAGCG TGGTCGAGAC CCGCGATTAC
GGCCCCGACA CGGCGGTCAC CTACGAGAGG ATCTGA
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| Protein sequence | MDLSEQQALD RRAMRLALAL GRRNLGRTWP NPSVGAVVVA EGRIVGQAVT AVGGRPHAEP
LALAMAGEAA HGATLYVTLE PCSHHGRTPP CTDATIAAGI ARVVTAIEDP DPRVAGRGHA
GLRAAGITVE TGLLREEAAR DHRGHFSRVT RGRPSLHLKL ARTRDGFAAP STGERLKITG
SVADGAVHLW RAHADAIMVG IGTARADDPS LTVRLPGLAE RSPLRIVLDS TLRLNPASHL
VRGARDLPTL VLTGRGAPAH ARRMLASFGV EIAFVPIDAA GRIDLPAALK ALAERGLTRI
CSEGGPALAD ALAAHDLIDA CTLITGSVTL GEAGGLPALG ANLARRLADG LLSVVETRDY
GPDTAVTYER I
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