| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3167 |
|---|
| Symbol | |
|---|
| ID | 5831001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 3518538 |
|---|
| End bp | 3519176 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641368968 |
|---|
| Product | riboflavin synthase, alpha subunit |
|---|
| Protein accession | YP_001640626 |
|---|
| Protein GI | 163852583 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0307] Riboflavin synthase alpha chain |
|---|
| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.639229 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCACCG GACTCGTCAG CGATGTCGGC CGCGTCGTCT CGGTGGAAGG CTCGGAGCGC
CTGCGCCGGA TCGTGATCGA GAGCGCCTAC GATCCCGCCG GCATCGCGCT CGGCGCCTCG
ATCGCCTGCT CCGGCCCCTG CCTCACCGCC GTCGCGGTGG AGCCGCACGG GGCGGGCTGC
CGCTTTTCGG TCGATGCCGC CGCCGAGACG CTCGCCCGCA CCACCGTGGG CGCGTGGCGC
GAGGGCACGC GGCTCAACCT CGAACGCTCG CTCAAGCTCG GCGACGAACT CGGCGGCCAC
CTTGTCACCG GCCATGTCGA CGGCGTCGCC GAGATCCTCG CCCGCGAGAC CGTGACCGGC
GAGGACAACC CCTGGGGGGC CAGCGAGCGC TTCACCCTGC GGGCGCCGGC CGCGCTCGCC
GGCTTCATCG CTGAGAAGGG CTCGATCTGC CTCGACGGCA CCTCGCTCAC CGTCAACGCG
GTCTCAGGCC ACGATTTCTC GGTGCTGCTG ATTCCGCACA GCCTCTCGGT GACGACCTGG
GAGGAGCGCC GCGAGGGGGA CCGGATCAAT CTGGAGGTCG ATCTGCTCGC CCGCTACGCC
GCGCGTCTCG CCGAGACGCG CGGGTTGCTG CCGGCGTGA
|
|---|
| Protein sequence | MFTGLVSDVG RVVSVEGSER LRRIVIESAY DPAGIALGAS IACSGPCLTA VAVEPHGAGC
RFSVDAAAET LARTTVGAWR EGTRLNLERS LKLGDELGGH LVTGHVDGVA EILARETVTG
EDNPWGASER FTLRAPAALA GFIAEKGSIC LDGTSLTVNA VSGHDFSVLL IPHSLSVTTW
EERREGDRIN LEVDLLARYA ARLAETRGLL PA
|
|---|
| |