| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3162 |
|---|
| Symbol | |
|---|
| ID | 5832538 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 3513717 |
|---|
| End bp | 3514238 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641368963 |
|---|
| Product | 6,7-dimethyl-8-ribityllumazine synthase |
|---|
| Protein accession | YP_001640621 |
|---|
| Protein GI | 163852578 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0054] Riboflavin synthase beta-chain |
|---|
| TIGRFAM ID | [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.143808 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCTCCC AACGCCGGGA CGCGGACGCG CCCAAGGACA GCCCCAAAAG CATCCTCGAA
AGCCTCGCCG GCACCCGCGT GCTCGTGGTC GAGGCGCGCT ACTACGACGA CATCGCCGAC
GAATTGCTGG CCGGTGCCCG CGCGGCCATC GAAGCGGTCG GCGCCGAGGC GCGGGTCTTC
ACGGTGCCGG GTGCCCTCGA GATCCCCGCC GCCATCGCGA TCCTGATGGA TGCCGGTCGC
AAGGCCGGCG GCCCCTACGA TGCGGCGGTG GCGCTCGGCT GCGTCATCCG CGGCGAGACC
GGCCATTACG ACATCGTCGC CGGCGAGAGC GCCCGCGCGC TGATGGACCT TTCCGTGGCT
GAGCACCTGC CGCTCGGCAA CGGCATCCTC ACCGTGGAGA CCATGGAGCA GGCGCTCGCT
CGCGCCCGGG TCTCCGACAT GAACAAGGGC GGCGGTGCAG CAGAGGCGGC CCTGAGCCTC
CTCGCCATCA AGCGCGCCGC CAACCTGGAA CCCGCCCGAT GA
|
|---|
| Protein sequence | MVSQRRDADA PKDSPKSILE SLAGTRVLVV EARYYDDIAD ELLAGARAAI EAVGAEARVF
TVPGALEIPA AIAILMDAGR KAGGPYDAAV ALGCVIRGET GHYDIVAGES ARALMDLSVA
EHLPLGNGIL TVETMEQALA RARVSDMNKG GGAAEAALSL LAIKRAANLE PAR
|
|---|
| |