| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3160 |
|---|
| Symbol | |
|---|
| ID | 5832536 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 3512222 |
|---|
| End bp | 3513199 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641368961 |
|---|
| Product | thiamine-monophosphate kinase |
|---|
| Protein accession | YP_001640619 |
|---|
| Protein GI | 163852576 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0611] Thiamine monophosphate kinase |
|---|
| TIGRFAM ID | [TIGR01379] thiamine-monophosphate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.172815 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGCG CGGGCGAGGA GGCGCTGATC GCGCGCTACT TCGCGCCGCT CAGCGGCCCC
GGCGCCGAGG GCCTGCGCGA CGACGCCGCG AGCCTGACGC CGACCCCCGG CCACGACCTC
GTGGTGACCG CCGACGCCAT CGTCGCCGGC GTTCACTACT TTCCCGACGA CCCGCCCGGC
TCCATTGCCA GCAAGGCGCT CGGCGTGAAC CTGTCGGATC TCGCCGCCAA GGGCGCCACT
CCGCGCGGCT TCCTCCTCAC CCTCGCCCTG CCGGACGACT GGACCGAAGC GTGGCTCGCG
GGTTTCGCCG AGGGTCTCGG TGAAGCAAGC CGCGCCCATG GCTGCCCGCT GCTGGGCGGT
GACACCGTGC GCTCCGGCGG CCCGGCGCTC ATCGGCGTGA CCGCCTTCGG CGAGGTGCCG
TCGGGCGCGA TCCTGCGGCG GCAGGCGGCC CAAGCCGGCG ACCGGCTCTG CGTCAGCGGC
ACCATCGGCG ACGCGGCTCT GGGCCTCGCC CTGCGGCTCG CGCCCGATCC CGCGCTGGCG
CCCCTCCACC GCGATGCGCT CCTCGATCGC TACCTTCACC CGCGCCCGCG GCTGGCGCTC
GCCTCCGTGC TGCGGCGCCA CGCCCGCGCG GCCATGGACG TCTCGGACGG ATTGGCGGGC
GATCTTACGA AGATGTTCAC CGGCACCGGC CTGACCGCGC GGATCGACGT GCCGGCAGTG
CCGCTCTCCC CGGCCGCGCA GGCCGCCATC GTACGCGATG CGAGCCGGCT CGACACGGCT
CTCACCGGAG GGGACGATTA CGAGATCCTT TGCGCGGTGC CGCCCGGTTC CGTGGGCACG
TTCCTGGCCG AGGCCCGGGC CGCCGGGGTG CCCGTTGCCG AGATCGGCAC CGTGGAGGCC
GGCGACGAAC CGCCTCGCTT TCACGATGCG CACGGGTGCG AGATGGGCTT TGCCCGCCCC
TCGTTCAGCC ACTTCTGA
|
|---|
| Protein sequence | MARAGEEALI ARYFAPLSGP GAEGLRDDAA SLTPTPGHDL VVTADAIVAG VHYFPDDPPG
SIASKALGVN LSDLAAKGAT PRGFLLTLAL PDDWTEAWLA GFAEGLGEAS RAHGCPLLGG
DTVRSGGPAL IGVTAFGEVP SGAILRRQAA QAGDRLCVSG TIGDAALGLA LRLAPDPALA
PLHRDALLDR YLHPRPRLAL ASVLRRHARA AMDVSDGLAG DLTKMFTGTG LTARIDVPAV
PLSPAAQAAI VRDASRLDTA LTGGDDYEIL CAVPPGSVGT FLAEARAAGV PVAEIGTVEA
GDEPPRFHDA HGCEMGFARP SFSHF
|
|---|
| |