Gene Mext_3127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3127 
Symbol 
ID5834870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3479092 
End bp3479424 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content61% 
IMG OID641368927 
ProductSWIB/MDM2 domain-containing protein 
Protein accessionYP_001640586 
Protein GI163852543 
COG category[B] Chromatin structure and dynamics 
COG ID[COG5531] SWIB-domain-containing proteins implicated in chromatin remodeling 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.13314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACCA AGACGACGGA GAAGAAGGCG GCTGCGCCCA AGAGTGCCCC GAAGAAGGAG 
ACCGCCACGA AGGCTGCCTC CGGCACCAAG CCCAACGCGC TTCAGCAGCC CCTGAAGCCG
TCTCCCGAAC TCGCCGCCAT CGTCGGCGAC AATCCCCTGC CGCGCGGCGA AGTCGTCAGC
AAGGTGTGGG AGCACATCAA GAAGCACAAT CTCCAGAACC CGGAGAACAA GCGCGAGATT
CTCGCCGACG ACAAGCTGAA GAAGATCTTC GGCAAGGACA AGTGCTCGAT GTTCGAGATG
AACAAGCACC TCGCCGCGCA CCTCAAGTCC TGA
 
Protein sequence
MATKTTEKKA AAPKSAPKKE TATKAASGTK PNALQQPLKP SPELAAIVGD NPLPRGEVVS 
KVWEHIKKHN LQNPENKREI LADDKLKKIF GKDKCSMFEM NKHLAAHLKS