Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3124 |
Symbol | |
ID | 5834867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 3476923 |
End bp | 3477612 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641368924 |
Product | PRC-barrel domain-containing protein |
Protein accession | YP_001640583 |
Protein GI | 163852540 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.477663 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCTCAGAC TGATCCGGCC GATCGTGACA CCGGCGATCG CCCTCCTCGC TACGGCGGCC ATGGCCGCGG ACGGCTCGTC GGGTGCCCCC GGCGGCGCTT CGCCTCCTGT TGTGACCGCT CCGCCTCCCG CCGCGACCGC TCCGCCTCCG GCCGCAGCGC CGGCTGCACC CGCGAACGGT GCCGTGACGC AGTCCCAGGA GGGCGGCACC CCGGCGGTGG TGCTCGATAC CCAGGATTAC GAGAGCCTGC TCGGCAAGAG CGTGCGCGCG ATGAACGGCG ACGATCTCGG CCGGATCATC GACGTCATCA TCGACCGCGA CGGACGTCCC CGTGCCGCGG TGATCGATTT CGGCGGCTTT CTCGGCGTCG GCTCCCGCAA GATCGCGGTG GATTGGCGCG TTCTGAAGTT CACCACCGAG GGCAAGGTCG GGCGCCTCAC GCTCCAGCTC AACCGCAATC AGGTCCGCGT CTCGCCCGAA TACAAGTCCG GCGACCCAAT CGTCGTGCTC GGGGCCACTA GCCCGGGTGC TCCGGCCAGC CCAAGTGCCG CCAGCCCAAG TGCCGCCAGC CCGGGCGCTG CGAACACCGG TGCCGCCGTC CCGCCGGAAG GCGACGCCTC CGCCGAGAAG CCTGCCGTCC CGTCCGACAA GGCCCCGGAC CGGCCACCGG AGAAGACGCC GGACAAATGA
|
Protein sequence | MLRLIRPIVT PAIALLATAA MAADGSSGAP GGASPPVVTA PPPAATAPPP AAAPAAPANG AVTQSQEGGT PAVVLDTQDY ESLLGKSVRA MNGDDLGRII DVIIDRDGRP RAAVIDFGGF LGVGSRKIAV DWRVLKFTTE GKVGRLTLQL NRNQVRVSPE YKSGDPIVVL GATSPGAPAS PSAASPSAAS PGAANTGAAV PPEGDASAEK PAVPSDKAPD RPPEKTPDK
|
| |