Gene Mext_3123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3123 
Symbol 
ID5835395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3475571 
End bp3476926 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content71% 
IMG OID641368923 
Productmajor facilitator transporter 
Protein accessionYP_001640582 
Protein GI163852539 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.554502 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCAA GCCCGGTGAC GGAACGGCGC GCCTATCCAG CGCGCGAGCG CGACAGCCAT 
CGCACCGACC TGCGCGAGCG CGGCGGCCCC CGTCCGGTGC GGCGCGCGGG CCGACCGAGC
ACGCCCGGTC CCGCCGATCC GTCGCGCCGG GCGACCTACG GCCTCGACGC GTTCACGTTC
TTCATCGCCA ACCTGCAGAC CGGGTTCGGG CCCTTCCTCG CCGTCTACTT CACCCAGCAG
AAGTGGACGC AGTCGGATAT CGGCCTTGCC CTCACCGTGG GCAGCCTCGT CAGCCTGCTC
GGGCAGATGC CGGGCGGCGC CTTCGTTGAT GCCTCCCGCT CGAAGCGCTT TGCCGCCGGT
TTCTCGGCGT TCTGGGTCGG CGCGAGCGCC GTGATGCTGG CAGCACTTCC GACCTATCTC
GTCGTCATGC TCGCCATGGC GATCCACTCG GCGGCGAGCT GCGTGCTGAC GCCGGCCATC
GCCGCGATCT CCATCGGCCT CGTCGGCCAT GCCCGGGCCG GCGAGCGGCT GGGGCGCAAT
GCCAGCTTCT CGGCGGTGGG CAACGCGCTC GGCGCCGCAG GCATGGGCGC GATCGGCTAT
TATCTTTCGA ACAACGCGGT GTTCTATCTC GCGGGCGTGC TGGTGATCCC GGCCTTGGTG
TCCCTGTCGT TCATCCCGTC GGGACGCGCC GTGGACGCCG GCAGGCCCCG GCCCGCCGCC
CAGGAACCAG AGCCGCGGGA GGCCGGCGGC ATCTCGGCGC TTCTGAAGAA CCGGGCGCTC
CTGTGCTTTG CCGCCTGCAT GGTGCTGTTC TTCCTGGCCA ATGCCGCGAT GCTGCCGCTG
GTCGGCAGCG TCATGACCCT GCGCGCCAGC GAGACCGCCA CGGCTCTGGT GGCTGCCTGC
ATCATGGTCC CGCAGGCGGT GCTCGCGCTC ACCGCCCCCT TCGTCGGGCG CCTCGCCGAA
CGCTGGGGAC GAAAACCGCT CCTCGTGATC GGTTTCGCGG CCCTGCCCGT CCGTGGCCTG
CTCTTCGCCT TCGTCAGCGA CCCCTACTGG ATGGTGGCGA TTCAGGTCTT CGACGGCATC
TCGGCCTCCG TTCTCGGCGT CATGGTCCCG CTGATCGTCT CCGACGTCAC CCGCGGCACC
GGCCGGTTCA ACACGGCACT CGGGGCGGTC GGGACCGGCA TGGGCATCGG CGCCGCCCTC
TCCACGGCGC TCGCCGGCTT CATGGCCGAC GAACTCGGCA GCCGGACCGC GTTCCTGGGG
CTCGCCATCG TCGGCGCCGC CGGCCTCGCC CTCGTCCTCC TGATCATGCC GGAGACCCGG
CGCAGGAACG GGGATGAGGC GCACGACCCG TCTTGA
 
Protein sequence
MTASPVTERR AYPARERDSH RTDLRERGGP RPVRRAGRPS TPGPADPSRR ATYGLDAFTF 
FIANLQTGFG PFLAVYFTQQ KWTQSDIGLA LTVGSLVSLL GQMPGGAFVD ASRSKRFAAG
FSAFWVGASA VMLAALPTYL VVMLAMAIHS AASCVLTPAI AAISIGLVGH ARAGERLGRN
ASFSAVGNAL GAAGMGAIGY YLSNNAVFYL AGVLVIPALV SLSFIPSGRA VDAGRPRPAA
QEPEPREAGG ISALLKNRAL LCFAACMVLF FLANAAMLPL VGSVMTLRAS ETATALVAAC
IMVPQAVLAL TAPFVGRLAE RWGRKPLLVI GFAALPVRGL LFAFVSDPYW MVAIQVFDGI
SASVLGVMVP LIVSDVTRGT GRFNTALGAV GTGMGIGAAL STALAGFMAD ELGSRTAFLG
LAIVGAAGLA LVLLIMPETR RRNGDEAHDP S