| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3118 |
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| Symbol | |
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| ID | 5835163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 3468027 |
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| End bp | 3469697 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641368918 |
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| Product | cyclic peptide transporter |
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| Protein accession | YP_001640577 |
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| Protein GI | 163852534 |
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| COG category | [P] Inorganic ion transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4615] ABC-type siderophore export system, fused ATPase and permease components |
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| TIGRFAM ID | [TIGR01194] cyclic peptide transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.150881 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.779975 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCAGG ACGGCACAAT CCTTCGTCAT TTCCGGCACG ACGCGATCCG GCTGCTCCGG
CCGGTCTGGC CGCTGGTGAG CGTGGCCACA GCGCTCGGGG CGGTCGGCGG CCTTGCCACC
GCCGCGGCTC TGGCCAAGAT CAACGAGGCC TTCTACGGCG AGGGCGCGCT CGCCGACGGC
GTGTTGCTGG CGTTTGCCGG GTTCGCGGCC TTGAGCGTTC TCGGCACGTT TGCGGCCAGT
TTCGGCAACA GCTACGCGGG CGGACGCATC CAGGCGGCGC TCAGCCGCGA CCTCACCGAT
AAGATCCTGA CCGCGCCGAT CGAACGGATC GAGCGCCTCG GCAAGCACAA GCTGCTCGCC
TCGCTTCAGG GCGACGTGAC CACCATCTTC ACAGCCATCG CGTTCCTCTC GCCGATGGTG
GTCGCGGGCG GGACGCTCAT CGGTTGCGCG GCCTACATGA TCCTCCTGTC ACCCGCCCTC
TCGGCGGTGA CGGCGGCGGT CCTGATCCTC GAGAGCCTCG GCGCGAACGC CCTGCGCCGG
AACATGCTCC GGTCCTTCGA GGAGGTTCGC AAGAACCGCG AGGCGACCCA GAAGCACTAC
CTCACCCTCA CCGAGGCGGC GAAGGAGTTG CGCATCGGCC GCGAACGCCG GCTCCACCTC
CGCGACGTCG CCCTCAGTGC CTGCATCGAG CAGGGGCGCC ATTTGATGAC GCGGATCGCC
GTCATCCAGC AATCGCTGTC GATGCTGAGC CAATCGACCA ACTTCCTGCT GTTCGCCGGT
CTCATCGCCT ACAAGGTCCT GGCCGGCATC AGCGGCGCCG AACTCTCCGG CTTCGTGCTC
GTGCTGCTCT ACATCCAGGC GCCGATCGGC CAGCTCATCC ACTTCGTGCC GATGATCGGG
CAGGCCCAAG TGGCCTACCG GCGCATCGCC GAGTTCTCGG AAGAGGGAGC GGAGGCGGAA
GCCGGCCTGC TCGCTGCCAC GCCGTCGGAG GCGGGCCGCC GCATCCGTGA GATCACCCTG
CGCGGCGTCA GCCACGGCTT CCCGGCGGCC GGCGACAAGG CCCCCTTCGC CCTCGGCCCG
CTCGACCTGA CGATCCGGGC CGGCGAGATC CTGTTCATCG TCGGCGAGAA CGGCTCGGGC
AAGACGACGC TGATCAAGCT GCTGCTCGGT CTCTACCCGC CGCAAACGGG AGAGATCCTG
CTCGACGGCA TTCCGGTGAC GGCAGGGACG CGCGACGCCT ACCGCCAGCA CTTCTCGGCG
ATCTTCTTCG ACTACCACCT GTTCGACGAG CTGATCCCCG CCGACGGTGC CGGCCCGGAG
GCCGCCCGGC CCCTGCTGGA ACGGCTCGAT CTGGCCCACA CGGTCGGCAT CAGCGAGGGA
CGCTTCTCCA CCACCGAGCT CTCGACCGGC CAGCGCAAGC GCCTCGCCCT GGTCCAGGCC
GTTCTCGAAG GACGCCCGGT TCTCGTGCTG GACGAGTGGG CAGCGGAACA GGATCCGACC
TTCCGGCGCC GCTTCTACGA GGCGCTTCTG CCGGACCTGC GAAGCGGCGG CCGAACCCTC
ATCGTCATCA GCCACGATGA CCGCTACTTC GACGCCGCCG ACCGGGTGCT GCACTTGGCG
GAAGGACGGA TCGTGGAGAT CACGGAGAGG GCTGTGGCCG AGCCGGCCTG A
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| Protein sequence | MGQDGTILRH FRHDAIRLLR PVWPLVSVAT ALGAVGGLAT AAALAKINEA FYGEGALADG
VLLAFAGFAA LSVLGTFAAS FGNSYAGGRI QAALSRDLTD KILTAPIERI ERLGKHKLLA
SLQGDVTTIF TAIAFLSPMV VAGGTLIGCA AYMILLSPAL SAVTAAVLIL ESLGANALRR
NMLRSFEEVR KNREATQKHY LTLTEAAKEL RIGRERRLHL RDVALSACIE QGRHLMTRIA
VIQQSLSMLS QSTNFLLFAG LIAYKVLAGI SGAELSGFVL VLLYIQAPIG QLIHFVPMIG
QAQVAYRRIA EFSEEGAEAE AGLLAATPSE AGRRIREITL RGVSHGFPAA GDKAPFALGP
LDLTIRAGEI LFIVGENGSG KTTLIKLLLG LYPPQTGEIL LDGIPVTAGT RDAYRQHFSA
IFFDYHLFDE LIPADGAGPE AARPLLERLD LAHTVGISEG RFSTTELSTG QRKRLALVQA
VLEGRPVLVL DEWAAEQDPT FRRRFYEALL PDLRSGGRTL IVISHDDRYF DAADRVLHLA
EGRIVEITER AVAEPA
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