Gene Mext_3111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3111 
Symbol 
ID5835146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3461564 
End bp3463459 
Gene Length1896 bp 
Protein Length631 aa 
Translation table11 
GC content69% 
IMG OID641368911 
ProductTPR repeat-containing protein 
Protein accessionYP_001640570 
Protein GI163852527 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.651134 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGGAT ACGCCGCCCG CCGGAGCGCC ACCGCGCTCA CCCTGCTGCT TGCTTCGACC 
GGTCTCGGCT CCCTGCCGGC GGCGGCCATG CAGCCGCGGG AATCCTCACC GCTCTCCGAG
TACGAGCCGG CGGAATCGCT CGAGGGCAAC TTCCTCTCCG CCTATATCGC CGGTGCCTCG
AAGGACACGG CCGCCGCCGC GAGCTACTAC CGCGAGGCGG TGAAGGGCGA TCCGCGCAAC
GCCGAGCTTC TGGAGCGCGC CTTCGTGTCG CTCCTCGCCG ACGGCGCGAT GACCGACGCC
TTCCGCGCTG CCGAGCGGCT CGCCACCCGC GAAAGCTCGA ACGGCCTCGC TCAGCTCGCC
CTCGGCGTGC GCCAGCTCAA GGCCGGCCAG TACGGCCCTG CCCGCCAGAG CTTCGGCCGC
AGCGGCCGGG GGGCGGCCGC CGACCTCACC GGGACGCTGC TGACCGCTTG GGCCTATGCC
GGCGCGGGTG ACGGCAAGCG CGCCTACGAG ACGCTGAACC GCCTGCGCGG CGAGCGCTAC
TTCAACGTCT TCCGCGACTA CCATGCCGGG CTGATCGCCT CGGTCATCGG TGACCGGGCG
GAGGCCGAGC GCAAGCTGAA GGCAGCCTAC GACGCCGACC ACAACACCCT CCGCATCGTC
GACGGCTATG CCCGCTTCGA GGCCGGCATC GGCCGCACCG ATCTCGCCAT CGACGCCTAC
AGCGAGTTCG AGAAGGTGAT GCCGCGCCAC CCCCTCGTGG TGGACGCCCT CGACAAGCTC
AAGGCCGGCA AGCCGCTTAG CCCCCTGATC GCCTCCGCTC AGGAGGGCGC GGCGGAAGTG
CTGTACGGGC TCGGTTCGGC CGGCTCGACG CAGGGCGACG AGCTTCCGGC GGTGGTCTAT
CTGCGGCTCG CGCTCTACCT CGCCCCCGAC CACGCCGTGG GACGGCTGAC GCTCGCCGAC
GCCCTCGACC GCATGAAGCA GGTCGAGCGC TCGAACGAGG CCTATGCGCA GATCCCGGCC
TCCTCGCCGC TCAAGCTCAA CGCCGACATC CAGATCGGTC TCAACCTCGA GCAGTTGGGC
CGGGGCGACG AGGCGCTTCA GCACCTCGAT ACGGTCCTCA AGGCGAACCC CGACAACGTC
GACGTCATTT CGGCGCTGGG CAACGTGCAG CGCGCGCGCA AAAAGTTCAC CGAGGCGACC
GAGACCTATA CCCGCGCGAT CAACCTGATC GAGCCCGGCC GCGAGGCCAA CAACTGGACG
CTGTTCTACT TCCGCGGCAC CGCCTACGAG CGGGCCGGCG AGTGGCAGAA GGCCGAGGCC
GACCTCAAGA AGGCGCTGAA CCTCGTTCCG CCGACTCAGC CGAACGCCAA GGCGCAGGTT
CTCAACTACC TCGCCTATTC CTGGGTCGAT CGGAACATGA ACATTGACGA CAGCTTCACC
ATGCTGAAGC AGGCCGTCGA TCTGTCCCCG CGCGACGGCA TGATCATCGA CAGTCTCGGC
TGGGCCTATT TCCGCCTTGG CCGTTGGGAC GACGCGGTGC GCGAGCTGGA GAAGGCGGTC
GAGCTGAAGC CGGGCGACCC GACCATCAAC GACCACCTCG GCGATGCCTA TTGGCGCACC
GGCCGGCGGC TCGAGGGCAA GTTCCAGTGG CAACACGCCA AGGACCTGAA CCCCGAGCCC
GAGGAACTCG CCAAGATCAA CGCCAAGCTG AAGGACGGCT TGCCCGAGCC GGACAAGCCG
ACCGCCACCG CCGAGAACCC GCCCGCGCAG GACCCGGCGC AGACCGTGCC CGCCCCGGTG
GCGGCGCCGC ACAACGCGGA GAACCCGGAA TTGCCGAAGG GCGCCCCCGC CCCGAGCGAG
CCGCCGGGCG CCGCGGACAA GAAGCCGGGG AAGTGA
 
Protein sequence
MFGYAARRSA TALTLLLAST GLGSLPAAAM QPRESSPLSE YEPAESLEGN FLSAYIAGAS 
KDTAAAASYY REAVKGDPRN AELLERAFVS LLADGAMTDA FRAAERLATR ESSNGLAQLA
LGVRQLKAGQ YGPARQSFGR SGRGAAADLT GTLLTAWAYA GAGDGKRAYE TLNRLRGERY
FNVFRDYHAG LIASVIGDRA EAERKLKAAY DADHNTLRIV DGYARFEAGI GRTDLAIDAY
SEFEKVMPRH PLVVDALDKL KAGKPLSPLI ASAQEGAAEV LYGLGSAGST QGDELPAVVY
LRLALYLAPD HAVGRLTLAD ALDRMKQVER SNEAYAQIPA SSPLKLNADI QIGLNLEQLG
RGDEALQHLD TVLKANPDNV DVISALGNVQ RARKKFTEAT ETYTRAINLI EPGREANNWT
LFYFRGTAYE RAGEWQKAEA DLKKALNLVP PTQPNAKAQV LNYLAYSWVD RNMNIDDSFT
MLKQAVDLSP RDGMIIDSLG WAYFRLGRWD DAVRELEKAV ELKPGDPTIN DHLGDAYWRT
GRRLEGKFQW QHAKDLNPEP EELAKINAKL KDGLPEPDKP TATAENPPAQ DPAQTVPAPV
AAPHNAENPE LPKGAPAPSE PPGAADKKPG K