| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3110 |
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| Symbol | |
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| ID | 5835061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 3458980 |
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| End bp | 3460623 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641368910 |
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| Product | porin |
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| Protein accession | YP_001640569 |
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| Protein GI | 163852526 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.427716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.162976 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCGGT TGAAATCGGG CCTGCTGGCC TGCTGCGCCA GTCTCGCCGC CGGCCCTGCC
GGACACGCGG CGGATTTCCC CAAGGGGGAC AGCGGACTGG CCGACGACGT GCGCGCCTGC
AACGCCTACG GTGCCGGCTT CTTCTTCATT CCCGGTACGG ATACGTGCGT GCGCTTTTCC
GGCCGGGCGC GCTACGAGGC AGGTTTCGTT CCGAACCGCA ACCGCACGCA GAGCCAGGGT
GACCAATCCC AGGCGCGCGG GATGATCCGT CTCAATCTCG ATGCCCGCAG CCAAACCGAT
TACGGCGTCT TACGGGCGTT CCTCCGCATC GACGCCGCGA GCCGCACCGG CATCCTCCAG
TCCACCGGTA CGCAGCAGCG CATCGCCAAT GCCTTCCCGG CGCTCGGTCA GGATACGTTC
GGCCGCGTCC AGAACTTTTT CATTGCCGAA AAGGCCTTCG TCCAGTTTGC CGGCATCACC
GCTGGCCGCG CCGCCTCCTT CTTCGACTTC TACGCGCACG ATTATGAGAT GAGCGGCCTC
ACGACCGGAT CCAATCTCTC CTCGACCAAC CTTCTTGCCT ACACGTCGAG GATCGGCGGC
GGCCTGAGCC TGAGCCTGTC GATGGAAGAC CCGTTTTTCC GGAAGCAGCC GGTCTACGCG
GCCTCCGTCG CGGCCGCTGC TGCCCCGCTC GGTGCGCCCT CGCAGTTCGT CGCGCCGACG
GCGGCGCCGA CACCTGTGAT CCTGGCGACC GATGGCGGCT TCAACGCCAC GGGCGCTGCC
TTCCTCGACG CCGTGCAGCG CTCGCGCATG CCGGACTTCG TGGCAGCGCT GCACTACGAT
GACAGTTGGG GCTCCGCCCA TCTCTCCTCC GCCGTCGCGA ACATCAATGT GGGCGGCTTC
ATCGCCACCC CGGCGCTCGG TCCGGCCGGC ACCACCATCG CGAATGACAC GGCAGCCGCA
CTTCTGGCGG CGCGGGGTGT CACGTCCGGC GCGCAGACGG ATTACGGCTG GGCGGTGCAA
GCCGGCGTCA AGCTGAACCT GCCGATGATC GCATCGGGCG ATGGCATCTA CCTTCAGGCG
GCCTATGCCG AGGGCGCCAT GAACTACACC GGCTTCACGT TTTTCACGGG CAGCTACGCC
AGCAATCTGA CGCCAATTCA GGGGGCTTCC GTCCAGCAAT TCGTCTCGGA TGCCGTGGTC
AACCCGATCA CCGGTAAGCT CGAACTGTCG ACGAGCTTCA CCGTGGTCAG CTCCTTTCTC
CATTACTGGA CGCCGGAGTG GCGCTCGGCT TTCTACGGCA GCTACGGTGC GCTCAACTAC
AAGCGTGGAA CGCGCGAGAC CTTCAGCATG CTGAATGGGT TGGTTGGCAA CTCCGCCCCG
CCCAATGCTT TCGCCAATCC GGTTGCCTTC GGCCTCAGCC CCGTGCTTCG CGACACGGAT
CAGGTAATCG CCGGCGTGAG TCTGATCTGG TCGCCGGTCA GGGATCTCGA TATCGGCATT
GAGGGCACGT ATATCGGTAC TGCAGTCCAG AGCGGGCGCG TTCCGGATGC GACCTACCCG
ATCCTGGTGA ACGGTCTGCC GTTCGTGACG GCCAATCGCC ACGATGCGGG TCAGATCCGC
ATGCGCATCC AGTGCGATTT CTAG
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| Protein sequence | MSRLKSGLLA CCASLAAGPA GHAADFPKGD SGLADDVRAC NAYGAGFFFI PGTDTCVRFS
GRARYEAGFV PNRNRTQSQG DQSQARGMIR LNLDARSQTD YGVLRAFLRI DAASRTGILQ
STGTQQRIAN AFPALGQDTF GRVQNFFIAE KAFVQFAGIT AGRAASFFDF YAHDYEMSGL
TTGSNLSSTN LLAYTSRIGG GLSLSLSMED PFFRKQPVYA ASVAAAAAPL GAPSQFVAPT
AAPTPVILAT DGGFNATGAA FLDAVQRSRM PDFVAALHYD DSWGSAHLSS AVANINVGGF
IATPALGPAG TTIANDTAAA LLAARGVTSG AQTDYGWAVQ AGVKLNLPMI ASGDGIYLQA
AYAEGAMNYT GFTFFTGSYA SNLTPIQGAS VQQFVSDAVV NPITGKLELS TSFTVVSSFL
HYWTPEWRSA FYGSYGALNY KRGTRETFSM LNGLVGNSAP PNAFANPVAF GLSPVLRDTD
QVIAGVSLIW SPVRDLDIGI EGTYIGTAVQ SGRVPDATYP ILVNGLPFVT ANRHDAGQIR
MRIQCDF
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