Gene Mext_3048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3048 
SymbolflgF 
ID5835522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3391173 
End bp3391913 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content69% 
IMG OID641368848 
Productflagellar basal body rod protein FlgF 
Protein accessionYP_001640508 
Protein GI163852465 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAACG CGCTCTTCGT CGGAGTCTCC GCCCAGACCG CCCTGGCTCG CGAACTCGAC 
GTCATCGCCA ACAACATGGC CAACGTCTCG ACCACCGGCT TCAAGGCGCG CTCGGCCCGC
TTCCAGGAAT ATCTGATGCC GGTGGCCTCC GCCGACAGCT TCCAGCGGAG CGACCGCCGG
CTCTCCTACG TCATCGACCA GGGCACCCCG CTCGACCTCA CGCAGGGGTC GGTGGAGCCC
GACAGCAACC CGATGCACGT GGCCCTGCGC GGCGACGCTT TCCTCACCGT CCAGACGCCG
CAGGGCCTGC GCTACACCCG CAACGGCGCC TTCGAACTCG ATGCCACGGG CAACCTCGTC
ACCTCGGACG GCCACGCGGT GCAGGGCGAC GGCGGCCCGA TCACCATCGG CCAGCAGGAG
ACGGGTCTCG CCATCGCTCC CGACGGCACG ATCTCGACCA ATCTCGGCAT CCGCGGCCGG
CTGCGCCTCG TCACCTTCCC CAACGCTCAG GCACTGAAGT CGGAGGGTGC CAACCTGTTC
TCGTCCGAGG CGCCCGCCCG GCCCGCGGGC CCCGGTGCCC ATCTGGAGCC CGGCGCGCTG
GAGCGCTCCA ACGTGAAGCC AGTGGTCGAA ATGACCCGGC TGATGGACGT GAACCGCACC
TACTCGATGG TCTCGAGCGT GATCTCGCGC CTCGACGACC TGCGCGGCAC GGCGATCCGC
CGTCTCGCCG ACGTCGCCTG A
 
Protein sequence
MQNALFVGVS AQTALARELD VIANNMANVS TTGFKARSAR FQEYLMPVAS ADSFQRSDRR 
LSYVIDQGTP LDLTQGSVEP DSNPMHVALR GDAFLTVQTP QGLRYTRNGA FELDATGNLV
TSDGHAVQGD GGPITIGQQE TGLAIAPDGT ISTNLGIRGR LRLVTFPNAQ ALKSEGANLF
SSEAPARPAG PGAHLEPGAL ERSNVKPVVE MTRLMDVNRT YSMVSSVISR LDDLRGTAIR
RLADVA