| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3032 |
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| Symbol | |
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| ID | 5835501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 3378046 |
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| End bp | 3379698 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641368832 |
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| Product | threonine dehydratase, biosynthetic |
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| Protein accession | YP_001640492 |
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| Protein GI | 163852449 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.08767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGGAT CCGGCTCTGA CGGTGCGGCC CCTTCCCTCG CCTCCCGCCC TCGCATCCCG
GCCGCGGAAG GACTAAGTCC CGGGCGTGCC CTGCCCGATG ACGCGGCCGA AAGCCTGCCC
GTGACCGACT ACATCAAGAA GATCCTCTCT GCCCGCGTCT ACGACGTGGC GATCGAGAGC
CCCCTCGATC CGATGCCCCG CCTGACGAAG CGGCTCGGCC GTCCCGTGCT GCTCAAGCGC
GAGGATCTGC AGCCGGTCTT CTCGTTCAAG CTGCGCGGCG CCTACAACAA GATGGCCTCG
CTGCCCCAAG AGCGGCTCGA GAGCGGCGTG ATCTGCGCCT CGGCCGGCAA CCACGCGCAG
GGCGTGGCGC TAGCGGCGGC CAAGCTCGGC GTGCGGGCGG TGATCGTGAT GCCGCGCACG
ACGCCCGCGA TCAAGGTCGA TGCCTGCCGG GCCCGCGGCG CCGAGGTCGT GCTGCACGGC
GACGCCTTCG ACGAGGCTCT GGCGGAGGCT CGGCGCCTCG AAGCGCAGTG GGGCCTGACC
TTCCTGCACC CGTTCGACGA TCCCGAGGTG ATCGCCGGAC AGGGTACGAT CGGCATGGAG
ATCCTGCATC AGCATACCGG ACCGATCGAG GCGATCTTCG TGCCGATCGG CGGCGGTGGC
TTGGCCGCCG GCATCGCCAC CTTCGTGAAA TATCTGCGCC CCGAGACCAA GGTGATCGGC
GTCGAGCCGG ACGACGCCGC CACCATGTCC GAGGCGCTCC GGGCGGGCGA CCGGGTGATG
CTGCCGAGCG TCGGGCTGTT CGCCGACGGC GTCGCGGTGC GGCAGGCCGG CGAGGAGACG
TTCCGGCTCT GCCGCGAGCA TCTCGACGCG GTCATCACCG TCGATACCGA TGCGATGTGC
GCCGCGGTCA AGGACATCTT CGACGACACC CGCGCGATCT CCGAGCCGTC GGGCGCACTG
AGTCTGGCCG GCGCCAAGGC CTGGTCAGCG AAGAATCCCG GTGCCGGGCC GCTGGTGGCG
ATCTCGTCGG GTGCCAACCT CAACTTCGAC CGCCTGCGCC ACATCGCCGA GCGGGCGGAG
ATCGGCGAGG AACGCGAGGT GCTGCTCGGC GTCACCATCC CCGAACGGCC GGGCGCCTAC
CGTGCCTTCA TCGGCGCGCT CGGGCCCCGC GCGATCACCG AATTCAACTA CCGCTACGCG
CAAGGCAGCG ACGCGCGCAT CTTCGTCGGC ATCAACCTGC CCGGCGGCAA GCCCGAGAAG
CGCGACCTGA TCGCCGCCCT GGAGAGCGCC GGCTACCGCG TCGCCGATAT GAGCGACAAC
GAGATGGCCA AGGTGCATGT CCGCTACATG GTGGGCGGCC GCGCGGCGGG GCTCGCCGAC
GAGCGGCTCT ACCGCTTCCA GTTCCCCGAG CGGCCGGGCG CGCTGATGAA GTTCCTCGAA
GCGCTCGGCG ACGGCTTCAA CATCAGCCTG TTCCACTACC GCAATCACGG CGCCGATTAC
GGCCGTGTGC TCGCGGGGAT CGAGGTGCCG GCAGCGGAGC GCGCCCGCTT CGAGGCCGCC
CTCGAAGCGC TCGCCTATCC CTATGTCGAT GAGACCGACA ACCCGGCTTA CCGGCTGTTC
CTCGACAACG GCATCGGAGC GGCCGACCAC TGA
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| Protein sequence | MPGSGSDGAA PSLASRPRIP AAEGLSPGRA LPDDAAESLP VTDYIKKILS ARVYDVAIES
PLDPMPRLTK RLGRPVLLKR EDLQPVFSFK LRGAYNKMAS LPQERLESGV ICASAGNHAQ
GVALAAAKLG VRAVIVMPRT TPAIKVDACR ARGAEVVLHG DAFDEALAEA RRLEAQWGLT
FLHPFDDPEV IAGQGTIGME ILHQHTGPIE AIFVPIGGGG LAAGIATFVK YLRPETKVIG
VEPDDAATMS EALRAGDRVM LPSVGLFADG VAVRQAGEET FRLCREHLDA VITVDTDAMC
AAVKDIFDDT RAISEPSGAL SLAGAKAWSA KNPGAGPLVA ISSGANLNFD RLRHIAERAE
IGEEREVLLG VTIPERPGAY RAFIGALGPR AITEFNYRYA QGSDARIFVG INLPGGKPEK
RDLIAALESA GYRVADMSDN EMAKVHVRYM VGGRAAGLAD ERLYRFQFPE RPGALMKFLE
ALGDGFNISL FHYRNHGADY GRVLAGIEVP AAERARFEAA LEALAYPYVD ETDNPAYRLF
LDNGIGAADH
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