| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3008 |
|---|
| Symbol | |
|---|
| ID | 5835380 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 3355669 |
|---|
| End bp | 3356163 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641368808 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001640468 |
|---|
| Protein GI | 163852425 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1430] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0666137 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGTGT TTCCCTTCGC GACAAAGTTC TTGCGCCTCG CCGCCTGCCT CGCCGCGCTG
GCGGCCTTGC CGGCGCTTCC GCTCCGCGCG CAGGAGGCGG CGCCCGCCGC CCAGGCCGCG
ACCGAGCCGC TCGGCATCGT CGCCAAGAAC GGCCGCCACG CCTTCCAGGT CGAGGTGATG
CGCACTGACG CGCAGCGCGC CAAGGGGCTG ATGTACCGCC GCTCCATGGC CGCCGACCAC
GGCATGCTGT TCGACTTCGA GCGGCCGGCG CCGGCCACGA TGTGGATGAA GAACACCTAC
CTGTCGCTCG ACATGGTGTT CATCCGCTCC GACGGCTCGA TCGCCCGGAT CGCCCCGGAT
ACCGAGCCGC TCTCGACCAA GGTGATCCCG TCGGGCGAGC CGGTTCTCGC GGTGCTCGAG
CTTAACGCCG GCACCGCCGC CAAGCTCGGC ATCCGCGCCG GCGACCGGGT CGAGCACCCG
ATGTTCAAGC GCTAG
|
|---|
| Protein sequence | MPVFPFATKF LRLAACLAAL AALPALPLRA QEAAPAAQAA TEPLGIVAKN GRHAFQVEVM
RTDAQRAKGL MYRRSMAADH GMLFDFERPA PATMWMKNTY LSLDMVFIRS DGSIARIAPD
TEPLSTKVIP SGEPVLAVLE LNAGTAAKLG IRAGDRVEHP MFKR
|
|---|
| |