Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3007 |
Symbol | |
ID | 5835379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 3355049 |
End bp | 3355657 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641368807 |
Product | cold-shock protein DNA-binding |
Protein accession | YP_001640467 |
Protein GI | 163852424 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0372335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAACG AACACGAACT GAGTGCCGTC GGGCTTCGTA TGCCGGAGAC GCGAGACCGC GCGATGGAGC GGGAGACCGA GGAGGAACGT CCGGCCGAAC TCTTGGAGGT CGCCGGGCGC ATCAAGTGGT TCGACGTCTC GAAGGGCTTC GGCTTCATCG TGCCGGATGA CGGCTCGGCG GACGTGCTGC TGCACATCAC CTGCCTGCGC CGGGATGGGC ACCAGGCCGC GAGCGAAGGC GCGCGGATCG TGGTCGAGGC GGTGCAGCGC GCCCGCGGCT GGCAGGCCTT CCGGGTTATC TCGCTCGATC AGTCCACCGC GCTCCACCCC TCCGAACTGC CGATGGCGCG CACCCACGAA GTCGTCACGC CGACGAGCGG CCTGGAGCGC GCAGTGGTGA AGTGGTTCAA CCGCCTGCGC GGCTTCGGCT TCCTCAGCCG CGGCGACGAC ACGCCGGACA TCTTCGTCCA CATGGAGACC CTGCGCCGCT ACGGCATCGC CGAGCTGAAG CCCGGCGAGG AGGTGATGGT GCGCTACGGC GACGGCTCGA AGGGTGCTAT GGCGGCGGAA GTCCGCCTCG TCGACGGGGC GCTTCCGGCT TCCCATTGA
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Protein sequence | MSNEHELSAV GLRMPETRDR AMERETEEER PAELLEVAGR IKWFDVSKGF GFIVPDDGSA DVLLHITCLR RDGHQAASEG ARIVVEAVQR ARGWQAFRVI SLDQSTALHP SELPMARTHE VVTPTSGLER AVVKWFNRLR GFGFLSRGDD TPDIFVHMET LRRYGIAELK PGEEVMVRYG DGSKGAMAAE VRLVDGALPA SH
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