Gene Mext_3007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3007 
Symbol 
ID5835379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3355049 
End bp3355657 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content69% 
IMG OID641368807 
Productcold-shock protein DNA-binding 
Protein accessionYP_001640467 
Protein GI163852424 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0372335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAACG AACACGAACT GAGTGCCGTC GGGCTTCGTA TGCCGGAGAC GCGAGACCGC 
GCGATGGAGC GGGAGACCGA GGAGGAACGT CCGGCCGAAC TCTTGGAGGT CGCCGGGCGC
ATCAAGTGGT TCGACGTCTC GAAGGGCTTC GGCTTCATCG TGCCGGATGA CGGCTCGGCG
GACGTGCTGC TGCACATCAC CTGCCTGCGC CGGGATGGGC ACCAGGCCGC GAGCGAAGGC
GCGCGGATCG TGGTCGAGGC GGTGCAGCGC GCCCGCGGCT GGCAGGCCTT CCGGGTTATC
TCGCTCGATC AGTCCACCGC GCTCCACCCC TCCGAACTGC CGATGGCGCG CACCCACGAA
GTCGTCACGC CGACGAGCGG CCTGGAGCGC GCAGTGGTGA AGTGGTTCAA CCGCCTGCGC
GGCTTCGGCT TCCTCAGCCG CGGCGACGAC ACGCCGGACA TCTTCGTCCA CATGGAGACC
CTGCGCCGCT ACGGCATCGC CGAGCTGAAG CCCGGCGAGG AGGTGATGGT GCGCTACGGC
GACGGCTCGA AGGGTGCTAT GGCGGCGGAA GTCCGCCTCG TCGACGGGGC GCTTCCGGCT
TCCCATTGA
 
Protein sequence
MSNEHELSAV GLRMPETRDR AMERETEEER PAELLEVAGR IKWFDVSKGF GFIVPDDGSA 
DVLLHITCLR RDGHQAASEG ARIVVEAVQR ARGWQAFRVI SLDQSTALHP SELPMARTHE
VVTPTSGLER AVVKWFNRLR GFGFLSRGDD TPDIFVHMET LRRYGIAELK PGEEVMVRYG
DGSKGAMAAE VRLVDGALPA SH