| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2977 |
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| Symbol | |
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| ID | 5835526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 3323008 |
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| End bp | 3323856 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641368777 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001640437 |
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| Protein GI | 163852394 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.481516 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGCA TTTGCAGCGC GGCTCCGAGC CAGCCTGGAA TGGTCCGGAC ACGCCGTCTG
CTCGCCCTGG CCCTCGTCGG CCTCGGGCTG GCCGGCTGCC AGAGCCGTTC GCCCGAGACG
ACCGGCTCGA TCGGCGGCCT CAACCTGCTC GGCGCGAACC GTGCCGAACG CTCGCCCCGC
GCCGAAATCG ATGCCCTGGC CGCGCGCTAC AACGCGGACC CGAACGACGT GCGCGCCGCC
ATGCGCTACG CCGCGACCCT GCGCGCGACC GACCAGAAAT CACAGGCCGT GGCGGTGCTG
CAGCAGGTCG CCCTGCGCAA CCCCAAAGAC AAGGTGGTGC TCGCCGCCTA CGGCAAGAGC
CTCGCCGATG CCGGGCGCTA CCAGGAGGCC AACGAAGTCC TTCAGAACGC CCACAGCCCG
GCCCAGCCCG ATTGGCGCGT GCTCTCGGCG CAGGGGATGG TGGCCGACGA GACCGGCGAC
CACGCCCGGG CGCAGAACCT CTACGACACC GCCCTCAAGA TTGCGCCGAA CGAGCCGCGG
ATCCTGTCGA ATCTCGGCCT GTCCTACGCA CTCTCCCGCC GCCTCGACGA GGCCGAAACG
ACCCTGCGTC TCGCCGTGGC CCAGCCGAAG GCCGATGCCC GCGTGCGCCA GAACCTCGCA
CTGGTGCTCG GCCTCAAGGG CCGCTACGAC GAGGCGGAGC AAGTGCTGGC CCAGGATCTC
GGCCCGGCGG AAGCGGCAGC CAACATGCGC GAGATGCGCG CCATGGCCGC CCGCCGCGCG
GCACCGAAGA CGGCCCAGGC CGTCGCGGCG ACGCCGGGGC GGCAGCTCGC ACGGTCGGCG
ATCCAGTAA
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| Protein sequence | MTGICSAAPS QPGMVRTRRL LALALVGLGL AGCQSRSPET TGSIGGLNLL GANRAERSPR
AEIDALAARY NADPNDVRAA MRYAATLRAT DQKSQAVAVL QQVALRNPKD KVVLAAYGKS
LADAGRYQEA NEVLQNAHSP AQPDWRVLSA QGMVADETGD HARAQNLYDT ALKIAPNEPR
ILSNLGLSYA LSRRLDEAET TLRLAVAQPK ADARVRQNLA LVLGLKGRYD EAEQVLAQDL
GPAEAAANMR EMRAMAARRA APKTAQAVAA TPGRQLARSA IQ
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