Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_2974 |
Symbol | |
ID | 5835548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 3320256 |
End bp | 3321101 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641368774 |
Product | cold-shock protein DNA-binding |
Protein accession | YP_001640434 |
Protein GI | 163852391 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.372989 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACGTG GTCGTGATTT CAGGGGGCCG CAGAAGCGCG GCTTCGACGA GGGTGGTTCC GAGCCGCGTT GGCCCGATGA ACTGCCCCCG AGCGGTGGTG ACCGCTTCGG CGGCGGCGGT AGCGCCGGCG GCAACCGCTT CGGCGGCGGT GGTGGTGGTT ACGGCGGCGG CGGCGGTGGC GGCTTCGACC GTGGCCCGGC GCGCGCGGCA GCTGCACCGA CGGGACCGGA GCGTGATGCG ACGGTCAAGT GGTTCAACAA GGAGAAGGGC TTCGGCTTCG TGGAGCTCGG CGACGGCTCC GGCGATGCCT TCCTCCACAT CCGCGCGGTC GAGGCCGCCG GTCACGACGA CCTCCTTCCC GGCACACGCC TGACGGTCCA GACCGCCCAG GGCCAGAAGG GCCCGCAGGT CACCGCAGTG AACAGCGTCG ACACCTCCAC GGCCGAGGCG GCTCCGCCCC GGCGCGAGGC CCCGCGCTTC GGCGGCGGCG GTGATCGCTT CGGTGGTGGC GGCGGTGGCG ACCGCTTCGG CGGCGGCGGC GGCGACCGTT TCGGTGGTGG CAGCCGTGAT CGCTTCGGCG GCGCGGGTGC TGGCGGCGGC GGCGGCGGCG GCGGACGCTT CGCTTCCGGC CCGTCGGTCG AGATGACCGG CACCGTGAAG TGGTACGACC CGGCCAAGGG CTTCGGTTTC GTCTCGGTGA ACGACGGCGG CAAGGACGTG TTCGTGCACC GTTCGGCGCT GTCCCGCGCC GGCCTCGACT CGCTGGCCGA AGGCCAGCAG GTCACCCTCG GCGTGGTCGA GGGCCAGAAG GGCCGCGAGG CCTCGAGCAT CACCGTCGAA TACTAA
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Protein sequence | MGRGRDFRGP QKRGFDEGGS EPRWPDELPP SGGDRFGGGG SAGGNRFGGG GGGYGGGGGG GFDRGPARAA AAPTGPERDA TVKWFNKEKG FGFVELGDGS GDAFLHIRAV EAAGHDDLLP GTRLTVQTAQ GQKGPQVTAV NSVDTSTAEA APPRREAPRF GGGGDRFGGG GGGDRFGGGG GDRFGGGSRD RFGGAGAGGG GGGGGRFASG PSVEMTGTVK WYDPAKGFGF VSVNDGGKDV FVHRSALSRA GLDSLAEGQQ VTLGVVEGQK GREASSITVE Y
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