Gene Mext_2974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_2974 
Symbol 
ID5835548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3320256 
End bp3321101 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content73% 
IMG OID641368774 
Productcold-shock protein DNA-binding 
Protein accessionYP_001640434 
Protein GI163852391 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.372989 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACGTG GTCGTGATTT CAGGGGGCCG CAGAAGCGCG GCTTCGACGA GGGTGGTTCC 
GAGCCGCGTT GGCCCGATGA ACTGCCCCCG AGCGGTGGTG ACCGCTTCGG CGGCGGCGGT
AGCGCCGGCG GCAACCGCTT CGGCGGCGGT GGTGGTGGTT ACGGCGGCGG CGGCGGTGGC
GGCTTCGACC GTGGCCCGGC GCGCGCGGCA GCTGCACCGA CGGGACCGGA GCGTGATGCG
ACGGTCAAGT GGTTCAACAA GGAGAAGGGC TTCGGCTTCG TGGAGCTCGG CGACGGCTCC
GGCGATGCCT TCCTCCACAT CCGCGCGGTC GAGGCCGCCG GTCACGACGA CCTCCTTCCC
GGCACACGCC TGACGGTCCA GACCGCCCAG GGCCAGAAGG GCCCGCAGGT CACCGCAGTG
AACAGCGTCG ACACCTCCAC GGCCGAGGCG GCTCCGCCCC GGCGCGAGGC CCCGCGCTTC
GGCGGCGGCG GTGATCGCTT CGGTGGTGGC GGCGGTGGCG ACCGCTTCGG CGGCGGCGGC
GGCGACCGTT TCGGTGGTGG CAGCCGTGAT CGCTTCGGCG GCGCGGGTGC TGGCGGCGGC
GGCGGCGGCG GCGGACGCTT CGCTTCCGGC CCGTCGGTCG AGATGACCGG CACCGTGAAG
TGGTACGACC CGGCCAAGGG CTTCGGTTTC GTCTCGGTGA ACGACGGCGG CAAGGACGTG
TTCGTGCACC GTTCGGCGCT GTCCCGCGCC GGCCTCGACT CGCTGGCCGA AGGCCAGCAG
GTCACCCTCG GCGTGGTCGA GGGCCAGAAG GGCCGCGAGG CCTCGAGCAT CACCGTCGAA
TACTAA
 
Protein sequence
MGRGRDFRGP QKRGFDEGGS EPRWPDELPP SGGDRFGGGG SAGGNRFGGG GGGYGGGGGG 
GFDRGPARAA AAPTGPERDA TVKWFNKEKG FGFVELGDGS GDAFLHIRAV EAAGHDDLLP
GTRLTVQTAQ GQKGPQVTAV NSVDTSTAEA APPRREAPRF GGGGDRFGGG GGGDRFGGGG
GDRFGGGSRD RFGGAGAGGG GGGGGRFASG PSVEMTGTVK WYDPAKGFGF VSVNDGGKDV
FVHRSALSRA GLDSLAEGQQ VTLGVVEGQK GREASSITVE Y