| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2964 |
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| Symbol | |
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| ID | 5830996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 3311400 |
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| End bp | 3312710 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641368764 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_001640424 |
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| Protein GI | 163852381 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02643] thymidine phosphorylase
[TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.277231 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCTCC CCCAGGAGAT CATCCGCGAC AAGCGCGACG GACACGCCCT GTCCGAGGCC
GACATCGCCG GCTTCATCGA GGGGCTGACG CGGGATCAGG TTACCGAGGG GCAGGCCGCG
GCGTTTGCCA TGGCGGTGTT CTTCCGCGGC CTCTCGCTCG ACGAGCGCGT GGCGCTGACC
CGCGCCATGA CGCATTCGGG CACGGTGCTC GCGTGGGATC TGCCCGGCCC CGTCCTCGAC
AAGCACTCCA CCGGCGGCGT CGGCGACACC GTGAGCCTTC CGCTCGCCGC GATGGTCGCG
GCCTGCGGCG GCTACGTGCC GATGATCTCC GGGCGCGGCC TGGGGCATAC CGGCGGCACG
CTGGACAAGC TCGCGAGCAT TCGCGGCTAC GACGTGACGC CGGGCCTCGA CCGGTTCCGC
AAGGTCACGG CCGAGGCCGG TTGCGCCATC ATCGGCCAGA CCGCCGAGCT CGCGCCGGCC
GACCGGCGCC TCTACGCGAT CCGCGACGTC ACCGGGACGG TGGAATCGCT CGATCTCATC
ACCGCGTCGA TCCTGTCGAA GAAGCTCGCG GCGGGGCTCC AGGGCCTCGT CATGGATGTG
AAGACCGGCT CCGGCGCCTT CATGGCCCGT CGCGAGGATG CGCGGGCGCT TGCCGAGAGC
ATCGTAACGG TCGCCAACGC GGCGGGACTG CGCACGCGCG CGCTCATCAC CGACATGGAC
GCCCCGCTGG CCTCCTGCGC CGGCAACGCG GTCGAGGTGG CCTATGCCGT CGATTACCTC
ACCGGTCGCG CCCGCGAACC GCGCTTCCAC GCCGTGACGA TGGCGCTGGC CGTCGAGATG
CTGGTGATCG GGGGGCTGGC TGCAAACATC GCGGAGGCGG AAGGGAAGCT GACGGCGGCG
CTCGATTCGG GCCGGGCCTG CGAGGCCTTC GCGCGGATGG TGGCGGCGCT GGGCGGCCCC
GGCGATTTCG TCGAGGCGGC ATACCGGCAC CTGCCCCCGG CGCCGGTCGT GCGGCCGGTG
CCGGCGCAGG AAGCGGGCGT GGTGGAGGCG GTGGAGACCC GCGCCATCGG CCTCGCGGTG
ATTGGCCTCG GCGGAGGGCG CACCCGGCCG CAGGATGCCA TCGACGCCCG CGTCGGTTTC
ACCGGCCTCG CGCGGCCGGG CGACCGACTG TCACCGAACG ATCCGATCGG CATCGTCCAC
GCCGCGGACG AGGCCGCCGC CGAGCGGGCA GCGGCATCGC TGCGGGCGGC CTATCGGATC
GGCGCAACGC CGCCGGAGCC ACGCGCGGCC GTACTGGAGC GCTTGGGCTG A
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| Protein sequence | MRLPQEIIRD KRDGHALSEA DIAGFIEGLT RDQVTEGQAA AFAMAVFFRG LSLDERVALT
RAMTHSGTVL AWDLPGPVLD KHSTGGVGDT VSLPLAAMVA ACGGYVPMIS GRGLGHTGGT
LDKLASIRGY DVTPGLDRFR KVTAEAGCAI IGQTAELAPA DRRLYAIRDV TGTVESLDLI
TASILSKKLA AGLQGLVMDV KTGSGAFMAR REDARALAES IVTVANAAGL RTRALITDMD
APLASCAGNA VEVAYAVDYL TGRAREPRFH AVTMALAVEM LVIGGLAANI AEAEGKLTAA
LDSGRACEAF ARMVAALGGP GDFVEAAYRH LPPAPVVRPV PAQEAGVVEA VETRAIGLAV
IGLGGGRTRP QDAIDARVGF TGLARPGDRL SPNDPIGIVH AADEAAAERA AASLRAAYRI
GATPPEPRAA VLERLG
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