Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_2950 |
Symbol | lpxC |
ID | 5831451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 3296187 |
End bp | 3297134 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641368750 |
Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
Protein accession | YP_001640410 |
Protein GI | 163852367 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0164597 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGACGA ACCAACAGAC AACACTCAAA ACGTCCGTGA CGCTGACCGG AATCGGAGTC CACTCCGGCA ACCCGGCGGA GATCACGCTC CACCCCGCCA AAGCCAACCA CGGTATCGCC TTCCTCCGGA CGGGCACGAC CACCGGCAAC GACCGGATCA TCAAGGCCCA CTTCGCCTGC GTCTCCGCCA CCGAGCTGTG CACCGTCATC GGTGACGTCG AGACCGGCGC CGTCGCCACC ATCGAGCATC TGATGTCGGC CCTCTACGGG CTCGGTGTCG ACAACGCTCT GGTCGAGATC GACGGCCCCG AGATGCCGAT CCTCGACGGC AGCGCCCGCC TCTTCGTCCA AGCCATCGAC AGCGTCGGCC TGGCCCTCTG CGGCGCCCCG CGCCGCTGGA TCAAGGTGCT CCAGCCCGTC CGCATCGAGG CCGGCCGCGC CTTCGCCGAA CTCCGCCCGA TCGACCGCGG CTTCCGCCTC GACGTGGAGA TCGACTTCGA ATCCCCGGTG ATCGGCCGCT CGCGCAAGGC GATGGACCTG ACCCCGGCCG CCTACCGCCG CGAGATCGCC CCCGCCCGCA CCTTCGGCAT GATGAAGGAC GTGGAGCGCT ACTGGAAGGC GGGCTTCGCG CTCGGCGCCT CCCTCGACAA CACGGTCGCC GTCGGCGAGA CCGCCGTCGT CAACCCGGAG GGCCTGCGCT TCGCGGACGA GTTCGTCCGT CACAAGTTCC TCGACGCGGT CGGCGACCTC GCGCTGGCTG GCCTGCCGCT CCAGGGCGCC TACCGCTCCT ATTGCGGCGG CCACCGCATG AATGTCGGCA TCCTCGAAGC CCTGTTCGCC GACCGCGCGA ACTACGCCAT CGTCGAGGGC CAGGGCACCC GCCGCGAGAC CGCCCGCGCC GACTTCGGTG CTGGCCTCGG GCTCGCCGCC TTCGCCGCCG AACTGTAA
|
Protein sequence | MRTNQQTTLK TSVTLTGIGV HSGNPAEITL HPAKANHGIA FLRTGTTTGN DRIIKAHFAC VSATELCTVI GDVETGAVAT IEHLMSALYG LGVDNALVEI DGPEMPILDG SARLFVQAID SVGLALCGAP RRWIKVLQPV RIEAGRAFAE LRPIDRGFRL DVEIDFESPV IGRSRKAMDL TPAAYRREIA PARTFGMMKD VERYWKAGFA LGASLDNTVA VGETAVVNPE GLRFADEFVR HKFLDAVGDL ALAGLPLQGA YRSYCGGHRM NVGILEALFA DRANYAIVEG QGTRRETARA DFGAGLGLAA FAAEL
|
| |