| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2917 |
|---|
| Symbol | |
|---|
| ID | 5832981 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 3259240 |
|---|
| End bp | 3260496 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641368717 |
|---|
| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
|---|
| Protein accession | YP_001640377 |
|---|
| Protein GI | 163852334 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.278124 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.715965 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGAGA GACGGTTCCG AGCGGCGCGC TGGGCGCTCG CGGGAATGCT GGCCGCAATT
GTCAGTGCGT TCCTTCATCC GGCGCCCGCG CGCGCCCAGA CGTTCCAGAC GGCGGCCGCG
CACGCGATCC TGATCGATGC CGATTCCGGC TCGGTGCTGT TCGAGAAGGC GGCCGACGAG
CCGTTCTCCC CGGCGAGCAT GGCCAAGCTG ATGACGGCGG AAATCGTGTT CCGCGCCATC
AAGGAAGGGC GCCTCTCGAT GGACACCGAA TTCACGGTGA CCGAGGACGC GTGGCGCCGC
GGCGGGGCCG GGGGCGGCGG CTCGTCGATG TTCGCGCAGG TCAACAGCCG CATCAAGCTC
TCCGACCTGC TGCGCGGGCT GATCGTGCAG TCGGGCAACG ACGCGGCGAT CACCATCGCC
GAGAACATGG CGGGCACCGA GGACGCCTTC GCCGGGATGA TGAACCAGCG CGCCAAGGAG
ATCGGGCTGA CGCGCTCGAC CTTCCGCAAC GCGACCGGCT ACTCGGCCCC CGACCAGAAG
GTGACCGCCC GCGACATGGC GCGGATCGCC CAACACCTCA TCGACACCTA CCCCGAATTC
TACAAGATCT ATTCCGAGCG TGAATTTACC TGGAACAAGA TCAAGCAGCA GAACCGCAAC
CCGCTCCTGA CCCTCGATAT CGGCGCCGAC GGGTTGAAGA CCGGCTACCT CGAAGAGTCG
GGCTACGCGC TCACCGGCTC GGCGGTGCAA AACGGCCAGC GGCTGATCAT GGTGGTCTCG
GGCCTGAAGA CCGCGCGTGA CCGCGCGGCG GAAGCCCGCA AGATGATGGA ATGGGGGTTC
CGCGCCTTCG AGCCGCGGCA GGTCTTCGCC GCGAACGAGA CGGTTGCCGA GGTCTCGGTC
TTCGGCGGCG AGAAGGGCTC CGTGCCGGTG GTGGCCAACA AGCCGGTGCG CCTGCTGCTG
CCGCGCGGCA CCTCGGATCG GGTGACCGCC AAGGTGGTCT ACCAGGGGCC GCTCGTCGCC
CCCGTGGCGC AGGGCCGCGA GGTCGGCCGC CTGCGCGTCA CCCGCGGCGA CAGCCTCGCC
CTGGAGCAGC CGGTTTATGC CGGGGAGACG GTGGAGGCCG GCACCCTGTC GCAGCGGGCC
CTCGACGCGG CGATGGAAGT CGGCACCGAC CTCGTCCGCC GCGCCTTCGA GAAGGCCAAG
GGCGGCAACG GCTCCGGCAG CACATCCACG GCCGGCACGG CCAGCGGCAA CTCCTGA
|
|---|
| Protein sequence | MCERRFRAAR WALAGMLAAI VSAFLHPAPA RAQTFQTAAA HAILIDADSG SVLFEKAADE
PFSPASMAKL MTAEIVFRAI KEGRLSMDTE FTVTEDAWRR GGAGGGGSSM FAQVNSRIKL
SDLLRGLIVQ SGNDAAITIA ENMAGTEDAF AGMMNQRAKE IGLTRSTFRN ATGYSAPDQK
VTARDMARIA QHLIDTYPEF YKIYSEREFT WNKIKQQNRN PLLTLDIGAD GLKTGYLEES
GYALTGSAVQ NGQRLIMVVS GLKTARDRAA EARKMMEWGF RAFEPRQVFA ANETVAEVSV
FGGEKGSVPV VANKPVRLLL PRGTSDRVTA KVVYQGPLVA PVAQGREVGR LRVTRGDSLA
LEQPVYAGET VEAGTLSQRA LDAAMEVGTD LVRRAFEKAK GGNGSGSTST AGTASGNS
|
|---|
| |