Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_2889 |
Symbol | |
ID | 5835069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 3237385 |
End bp | 3238290 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641368690 |
Product | cell wall hydrolase SleB |
Protein accession | YP_001640350 |
Protein GI | 163852307 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3773] Cell wall hydrolyses involved in spore germination |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCGTACGA GGCGCGTTCG AGGCCTGGGG ATCGGCCCCC GCTGGATCGT CTCGGCCGTG GTGCCGTGGA TGCTGGCCAG CGGCCTGCTG GTTTCCTTCA CCGCCACCGC GGGCACCGAT GCCACGCTTC GGCCCGCCCA GCTCTCGGAG CGGGATGTCA CCGCGACCGG CGCGCTCGTG GCGTCCACCG CCTGGAGCCC GGACGTCATC GATGCGGGTC TCGTGGCGCC CGGCGCCTCC CATGAATCCG AGCCCGGAGA AGACGGCCTG CCCGCGCTCG CCGACTCGGA TGGCGCCACC CCCGCCACGC CCCGCGCCGT CGCCCTGTCC TCGGTCACGC CCGCGCCCGC CGACGCGACC CCGATCGAGG TCGCCGCGGC GAACCTCGCC CTACCTGGCT TCTCGGCCCG TCTCGATCGC GGCCCTTCCG CCCTCGATCC GCAGATGACG GCGCCGGAGG CCAAGTCTCA TTATGCCGAC CTGATCGATC CGAATGCGAT GGACCGCGAG CAGCGCTGCC TCGCCGAAGC CGTCTACTTC GAGGCGCGCA GCGAGCCCGA GGAGGGGCAG GCCGCTGTCG CGCAGGTCAT CCTGAACCGC GTGAAGAGCG GGCTCTACCC GTCCTCGGTC TGCGGCGTCG TCTACCAGAA CCGCCACCGC TTCATGGGGT GCCAGTTCTC CTTCGCCTGC GAGGGCAAGG CTTTGCGCAT CACCGACGCC GAATCCTGGC GCAGCGCGAC CCGCGTCGCC AGCGCGGTGA TCGACGGCCG CACCTATGTC AGCGAGGTCG GCGGCGCGAC CCACTATCAC GCCGATTACG TCCGCCCCGG CTGGTCGCGC CGGCTCAAGC GCAAGGACAT GATCGGCCGG CACATTTTTT ATCAGCTGAA GCCGAACCAG ACCTGA
|
Protein sequence | MRTRRVRGLG IGPRWIVSAV VPWMLASGLL VSFTATAGTD ATLRPAQLSE RDVTATGALV ASTAWSPDVI DAGLVAPGAS HESEPGEDGL PALADSDGAT PATPRAVALS SVTPAPADAT PIEVAAANLA LPGFSARLDR GPSALDPQMT APEAKSHYAD LIDPNAMDRE QRCLAEAVYF EARSEPEEGQ AAVAQVILNR VKSGLYPSSV CGVVYQNRHR FMGCQFSFAC EGKALRITDA ESWRSATRVA SAVIDGRTYV SEVGGATHYH ADYVRPGWSR RLKRKDMIGR HIFYQLKPNQ T
|
| |