| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2882 |
|---|
| Symbol | |
|---|
| ID | 5835192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 3229330 |
|---|
| End bp | 3230202 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641368683 |
|---|
| Product | porin |
|---|
| Protein accession | YP_001640343 |
|---|
| Protein GI | 163852300 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3637] Opacity protein and related surface antigens |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.174474 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCCT TCCTTCGCGC CGGCACGGCC ATCGCCGGCA TCGCCTTCGC CGGTTCGGCG
CTCGCCGCCG ACCTCCCGCG CCGCGCGGCT CCGCCGCCGG TGTTCCAGCC GGTGCCGGTG
TTCACCTGGA CGGGCTTCTA CGCCGGTTTC AACGCCGGTT ACGGCTTCGG CACCCAGGAT
GACCGCGTCC CGACCGTGAT CGGCGTCGGC CCGGCCTCCC TGCTCGTGCC CCCGGGCACC
ACCGCCGTGG TCGCCTTCAG CAACCGTGAG TCCAACGAAG GCTTCGTCGG CGGCGGTCAG
ATCGGCTACA ACTACCAGTT CACCCCGGGC TCCGGTGTCG TGATCGGTGT CGAGGCCGAC
GCCCAGTACG CCGATTTCGG CCGTGACCGG AACCGCTTCC TCTCGACCAG CCCGCTGGCC
GCTCAGCAGG TGTTCAACCC GGGTGGTCTG TCCGGCCTCG ACTTCTTCGG CACCGTCCGC
GGTCGCCTCG GCTACGCCTT CGACCGCACC CTCGTGTACG GCACCGGCGG CTTCGCCTAC
GGCTCCGGCG GCGGTCGTGA GTTCGGCACC GGCGTGTCGA GCAACGACTT CCAGACCGGC
TGGGCCGCTG GTGGTGGTAT CGAGTACGCT CTCCCGACCG ACTCGTTCCT GAACTTCTTC
AAGTCGTCGG CCGTGACGCT GAAGGTCGAA GGTCTGTACG TGAACCTCGA TCGCGGCACC
GGCGGCCGTG GCGCCTTCGC GACCGACAAC CAGGGCCGCA CGGTCTCCAT CGGCAGCCCG
GGCACCGTGC TCGTCAGCGG TGGCCAGCAG GTCCGCGACA CCGAGTTCGC CGTCGTCCGC
GCCGGCCTGA ACTACAAGTT CGGCTCGTAC TAG
|
|---|
| Protein sequence | MKSFLRAGTA IAGIAFAGSA LAADLPRRAA PPPVFQPVPV FTWTGFYAGF NAGYGFGTQD
DRVPTVIGVG PASLLVPPGT TAVVAFSNRE SNEGFVGGGQ IGYNYQFTPG SGVVIGVEAD
AQYADFGRDR NRFLSTSPLA AQQVFNPGGL SGLDFFGTVR GRLGYAFDRT LVYGTGGFAY
GSGGGREFGT GVSSNDFQTG WAAGGGIEYA LPTDSFLNFF KSSAVTLKVE GLYVNLDRGT
GGRGAFATDN QGRTVSIGSP GTVLVSGGQQ VRDTEFAVVR AGLNYKFGSY
|
|---|
| |