| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2881 |
|---|
| Symbol | |
|---|
| ID | 5835191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 3228270 |
|---|
| End bp | 3229001 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641368682 |
|---|
| Product | putative periplasmic ligand-binding sensor protein |
|---|
| Protein accession | YP_001640342 |
|---|
| Protein GI | 163852299 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3416] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.492463 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGCG AAGAACGCGA CATCATCAAC GGCATCTTCC AGCGGCTCGA ACAGGCGTCC
GGACAGGCCC GCGACGCCGA TGCGGAGCGC TTCATCGCCG AGAAGCTTCG CAACCAGCCC
TACGCGCCCT ACGCCATGGC GCAGCTCATC TACGTGCAGG AAGAGGCGAT CAAGAGCCTC
AACCAGCAGC TCGAACAAGC CCGCGAGCAG GCTCAGTCCC AGCCGGCCGG CGGCGGTGGG
TTCCTGTCGA GCATCTTCGG CGGCGGACAG CGTTCCGAGC CGCAGCGTCC CGGCGGACAG
GCTTGGGGCC AACAGGGCGG CTACGGCCAG CAAGGTGGGT ATGGTGGTCC GCAGGGCGGC
CCGCAGCAGG GCTATGGTGG CGCTCCGCAG GGTGGGCCCT GGGGCGGCCA GCCTCAGCAG
CCCGCCCGCG GCGGCGGCTT CCTGGCCACG GCCCTGCCGA TGGCGGCGGG CGCAGCGGGC
GGCATGCTGC TCGGCAGCGC GCTCTCCAAT GCCTTTGCCG GAGGCCACTC TCAGCTCGGC
AGCGCCTCGG CGGCGGGCCT GACCGGCGGT GAGACGGGCG GCGGCATGTT TGGTGGCGGC
GGCGGCGATC AGGATCTCGG GTCGGCGCTC GGCGGTAGCG ACGGCGGCTT CCAGGACGCC
TCGTTCGGCG GCGGTGGCGG CGATGATTTC GGCGGCGACC TCGGCGATGG CGGCGACGAC
GACTGGGCCT GA
|
|---|
| Protein sequence | MNSEERDIIN GIFQRLEQAS GQARDADAER FIAEKLRNQP YAPYAMAQLI YVQEEAIKSL
NQQLEQAREQ AQSQPAGGGG FLSSIFGGGQ RSEPQRPGGQ AWGQQGGYGQ QGGYGGPQGG
PQQGYGGAPQ GGPWGGQPQQ PARGGGFLAT ALPMAAGAAG GMLLGSALSN AFAGGHSQLG
SASAAGLTGG ETGGGMFGGG GGDQDLGSAL GGSDGGFQDA SFGGGGGDDF GGDLGDGGDD
DWA
|
|---|
| |