Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_2859 |
Symbol | |
ID | 5834754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 3207572 |
End bp | 3208087 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641368660 |
Product | TspO/MBR family protein |
Protein accession | YP_001640320 |
Protein GI | 163852277 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3476] Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.268273 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGCAC TGGACATCCC CGAGCGGCCG GCCCTGCCGC CGATCCCGCG GCTTGCCGCC GCTATCCTCC CCGTCCTCCT GGTGACGGCG GTGGGGTCGC TCTCGACCGG CGCCAATATC GAGGAGTGGT ACACGACGAT CCGCAAGCCG GCCTTCAACC CGCCGAACTG GGTGTTTCCG CTGGCTTGGA CCGTCCTCTA CACCCTGATC GCTGTCTCGC TCTGGCGGCT GCTCGGCGCG CGCCCGGTGC CGGGGCCGGC CCGGAAGGCG TGGTGGCTGG CACTCGCCGC CTTCGGCGCC CAGCTCGTCC TCAATGCAGC CTGGACACCG GTCTTCTTCG CCGCCCACCA GCTCGGCCTC GCGCTGATCG TCGCGCTCGC CATGCTCGTG ATGATCTTGT GGACGATCCG CCTCTCCTGG CGCTTCGACC GGGCCGCGGC GTGGCTGCTC GTGCCCTACG CCGCCTGGGT GGCGTTTGCC TGCCTGCTCA ACGGAACGAT CTGGCAGATG AACTGA
|
Protein sequence | MSALDIPERP ALPPIPRLAA AILPVLLVTA VGSLSTGANI EEWYTTIRKP AFNPPNWVFP LAWTVLYTLI AVSLWRLLGA RPVPGPARKA WWLALAAFGA QLVLNAAWTP VFFAAHQLGL ALIVALAMLV MILWTIRLSW RFDRAAAWLL VPYAAWVAFA CLLNGTIWQM N
|
| |