| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2832 |
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| Symbol | |
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| ID | 5830915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 3175885 |
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| End bp | 3177612 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641368633 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001640293 |
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| Protein GI | 163852250 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.459229 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCC GTCTCGCGGC GGCGCTTCGG GCGCTGGCTG TCTCGCTCGT GCTCGCTGCC
GCATCGGTAG CCGGCAGCGT CGCCCTAGCC CATGAGGGTC ACAGCCACGG CGTCGAGGCG
CCGGCCCTCC CGGCACAGAC CACGCCGCGG GCCGAAGCGG CCTCGGCCAG CTTCGAACTC
GTGGCGGTGG CGGCCGGCGA CCGGATACGA TTCTATCTCG ATCGCTTCAC CAGTAACGAG
CCGGTGAACG GCGCCGAAAT CACAATCGAG ACGCCGGACG GTCCGGCCGA AACGCGGGCC
GTCGGCGACG GCCTCTACGA GATCGCGGCC CCGTGGCTCG CCCGTGGTCA TCGATACGAT
TTGCTCGCCA CCGTGACCGC CGACGGTATG ACGGACGTGC TGGCCCTCGA TCTGCAGCTG
CCGGAGCCGG CGGCAGCGAT GCCGGTCCAG GCCGAGGCGT CGGCGTGGCT CGCCAATCTC
CGCCGTCATC TCACCCACCA GGGTCCGATC GGTGCGGCCG CGGGCGGATT CCTGATCGGG
CTCGCCGTCA TCATGCTGGT GCGCTCGCGC CGGGCCCTCC CCGCCTTCGC GGTTCTCGCC
CTGACCCTGA CGCTGCTCCT CGGCACCGCC GCCCTCGCCC ATGAGGGACA TGATCACGAG
AAAAATGGTC CCGGCGAAGG GGAGGCCGCT TCGGTCCAGG GCGTGGCCCT CACCGCGCCC
ACGGCTGTGT CCGTCGAGCG CGCCCGGCGC CTGCCGGGCG GCGCGGTGTT CGTCCCGAAA
TCGACGCAGC GCCTGCTCGC TTTGCGCACC GGCCTCACCG GCATTGCCGA CCATCGCCGT
ACCGTCGAAT TGCCGGGGCG GGTTATCGCC GATCCGAACG CCAGCGGCGT GGTGCAATCG
TCGGTCGGCG GCCGCCTCGC TCCCCCGCCC GGCGGCTTCC CGAATCTCGG CACGCGGGTC
CGCAAGGGTG AGGTGCTCGC CACCGTCACG CCGCCGGTCC AGGCGGTCGA CCTCTCCGAC
ATGCGCCAGA CCCAAGGCGA TCTCGACCAG CAGATCGCGA TCACCACCCG CAAGGTCGCC
CGCTACGAGC GCCTCGCCAC GACCGGCGCG GTGGCGCAGA CGGCACTGGA GGACGCCCGC
GCCGAGCTCA CCGGTTTGAA GGACCGCCGC GCCGCCCTCG ACACGATCCG CCGCGCGCCC
GAAGAGCTGA TCGCCCCGGT GGACGGCGTC GTCGCCGAGC GGGCGGCGGT GGCCGGCCAG
ATGGCGGCGG CGGGTACGAT GGTGTTCCGC ATCGTCGATC CGGACAAGCT CTACGTCGAG
GCGCTGAGCT TCGTCGGCCT GGAGCCCGGC GCCGCCGCGA CCGCACGGCT GCCCGATGGG
CGCGCGCTGG CGCTGGCATC CCGCGGCGCC GGCCTCGCCG ACCGCAACCA AGCGGTGCCG
GTGCAGTTCG CGATCACCGG GAGCACCGAG GGTGTCCGGC TCGGTCAGTT CGTGACCGTG
ATGGCGCCGA CCGGCGAGAC CATCGGCGGA TTGGCCGTGC CCCGGGCGGG GGTCGTCCGC
ACCGAGAGCG GCGCGGTGGT CTACGAGCAC GTCTCCGCCG AGCGGTTCGA GCCGCGGCCC
GTGCGGGTCG AGCCGCTGGA TGCCGAGCAG GTGATCGTGG CCGGCGGCCT CGGCGCCGGC
CGGCGCATCG TGGTGCAGGG CGCCGAACTG CTCGATCAGG TTCGCTAG
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| Protein sequence | MTIRLAAALR ALAVSLVLAA ASVAGSVALA HEGHSHGVEA PALPAQTTPR AEAASASFEL
VAVAAGDRIR FYLDRFTSNE PVNGAEITIE TPDGPAETRA VGDGLYEIAA PWLARGHRYD
LLATVTADGM TDVLALDLQL PEPAAAMPVQ AEASAWLANL RRHLTHQGPI GAAAGGFLIG
LAVIMLVRSR RALPAFAVLA LTLTLLLGTA ALAHEGHDHE KNGPGEGEAA SVQGVALTAP
TAVSVERARR LPGGAVFVPK STQRLLALRT GLTGIADHRR TVELPGRVIA DPNASGVVQS
SVGGRLAPPP GGFPNLGTRV RKGEVLATVT PPVQAVDLSD MRQTQGDLDQ QIAITTRKVA
RYERLATTGA VAQTALEDAR AELTGLKDRR AALDTIRRAP EELIAPVDGV VAERAAVAGQ
MAAAGTMVFR IVDPDKLYVE ALSFVGLEPG AAATARLPDG RALALASRGA GLADRNQAVP
VQFAITGSTE GVRLGQFVTV MAPTGETIGG LAVPRAGVVR TESGAVVYEH VSAERFEPRP
VRVEPLDAEQ VIVAGGLGAG RRIVVQGAEL LDQVR
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