Gene Mext_2822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_2822 
Symbol 
ID5834428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3162004 
End bp3164403 
Gene Length2400 bp 
Protein Length799 aa 
Translation table11 
GC content68% 
IMG OID641368623 
ProductPAS sensor protein 
Protein accessionYP_001640283 
Protein GI163852240 
COG category[T] Signal transduction mechanisms 
COG ID[COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.354635 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTGC TGTCGCGACG TTCTGAAAAC GTGCCGTTCG ATGCCCCGTC CCCCGAGGAC 
GGCGCCGAGG CGGTCGCGCG CCGGTTCGAC TCACCCCCGC GCGGGCCGGG CTGGATCGGG
GCGGCGGTGG TGCTCACGGC GCTGATTTCC GCCTCGGTGA CCTTCCTCAT CCTCGCCGGC
ATCATCCAGA TCACGCGGAC GCCGACGACC GGCGTGGCCT TGCTCTCGGT CAACGCCGCG
CTGGTTCTCG CGCTGGTCGT CGTGATCGCC TGGGAGGCGC GGGTCTTCCT GCATGCCCGG
CGCACCCACG CCTCGGTGGC GCGGCTGCAC ACCCGAATCG TCGGCCTGTT CAGCCTGATC
GCGATCCTGC CGACGATCCT GCTCGCCATC GTCGCCTCGG TGACGATCGA TGTCGGCCTG
TCGCTCGGCT TCACCGACCG CGTCCGCGAC GTGGTGCTGA AATCGGTGCA GGTCGCGGAC
GCCTATCAGG AGAATCACTG CCAATCGCTC GCCCGCGAAA TCCGCATCTT CGCCGACGAC
TTGACGCGGG CGCGGCCGAA TTTCGATGTG AACCGCGAGT GGTTCGAGGG CTTCATGACC
ACCCGCGCCC AGGCGCTCGG CCTGCCGATC GTCAAGATCA TGCGCGGGCC GAACGAGGTG
GTGGCGCGCG CCAATATCGA TGTGCTCAAG CAGACGCGCC TGCCCTCGGC CGCCGCCTTC
GAGGACGCGG CGAAGTCGAG CGACCCGATC TGCCTGCTGC CGAACGAGGG CCGTGTCTTC
GCCGCCCTGA TGCGGATGCC GGCCTACGAC AACGCCGTGT TGCTGGTGCA GCGTGAGGTG
AGCCAGCTCG CCATCGACTT TCCCGGCGTC GCCCGCGCCG CGGCGGCCGA GTACCTGACC
TTCGACGAAC TGCGCCGCTA CGTGCAGATC GCCTTCGCCT CGGTCTTCAT CCTGATCGCC
CTGATCACGC TGCTCTCGGC GGTCTGGTTC GGGCTGAACT TCGCCAACCG TTTCGTCGCC
CCGATCCGTC GGCTCATCAA CGCCGCCGAC GAGGTGGCCG CGGGCAATTT CTACGCCCGC
GTTCCGGCCC GCAAATCCGA CGGCGACCTC GCCCATCTCG GCGAGAGCTT CAACACGATG
ACGCAGGAGC TGCGCCGCCA GCACGATGGC TTGCGCGCGG CCAACGACCT GATCGACCGC
CGCCGCCGCT TCACCGAGGC CGTGCTGTCG GGTGTTTCGC CTGGCGTGCT CGGCGTGGAT
GCCGACGGCG TCATCACCAT CGCCAATCCC GGCGCCGAGC GGACGCTGGG CCTCACGGCC
AAGGAGCTCG TCGGGCAGCC TTTGACGAAT GTCGTGCCGG AGATCGCCGC TCTGTTCCCG
GAAGCCGAGG GGCGCCACCG CGCGCTGCAG CAGCAGATCC AGCTCGTACG CGGCGGCCGC
GAGCGCACGA TTGCCGTCCG CGTCACGAGC GAGCAGGCGC AGGGCGAGGC GCGCGGCTAC
GTCGTGACGC TCGACGACAT CACCGATCTC GTCACGGCGC AGCGCACCTC GGCCTGGGCC
GACGTCGCCC GCCGCATCGC CCACGAGATC AAGAACCCGC TGACCCCGAT CCAGCTCTCG
GCCGAGCGCA TCCGGCGCAA GTACGGAAAA GTGATCACGA CCGACAAGGA CGTGTTCGAG
CAGTGCACCG CCACGATCGT GCGGCAGGTG GACGAGATCA AGCGGATGGT GGACGAGTTC
TCCTCCTTCG CCCGGATGCC GAAGCCCGCG ATTACGCAGC AGGATCTGAC CGAGATCGCG
CGCCAGAACC TGTTCATGCT GCGCATGGCG CATCCCGACC TCGATTTCCC CTTCGAGACG
GTCGGTGCCG ACGAGAAGGG CCGCGTCGTC GCCGCCTTCG ACGTGCGGCT GTTCTCCCAG
GCGCTCACCA ACATCCTCAA GAACGCCGTC GAGGCGGTTC AGGCGGTTCC GGAGGACGTG
CTGACGGCCG ATGGCGGCAA GGGTCGGGTC GCCCTGACGC TGGTCGTCGA AGAGGTCTTC
GTGGTGATCG AAGTCACCGA TAACGGAAAA GGCTTTCCGG CAGAGGGGCG CCAGCGCTTG
CTCGAACCCT ATATGACGAC CCGCGAGGGC GGGACCGGCC TCGGACTCGC GATCGTTTCC
AAGGTGCTCG AAGAGCATGG CGGGGGGATC GAGCTGAACG ACAACCCGGA GGGGCGCGGC
GGACAGGTCC GCATGCGGCT GCCGCGGGAA GTCGGACGGC CGGACGAACG GAATTCCGGG
ACCGGTGCGG GACAGGAGCG GGATCGCTCC GCGGCACCGG GCGCGCGTGA CAGGACAACG
ATGGATAAGA ATACGGAGGA CGCCATGGAA GCGCGACGCG TCGCGGAGGT GCAGCCATGA
 
Protein sequence
MPLLSRRSEN VPFDAPSPED GAEAVARRFD SPPRGPGWIG AAVVLTALIS ASVTFLILAG 
IIQITRTPTT GVALLSVNAA LVLALVVVIA WEARVFLHAR RTHASVARLH TRIVGLFSLI
AILPTILLAI VASVTIDVGL SLGFTDRVRD VVLKSVQVAD AYQENHCQSL AREIRIFADD
LTRARPNFDV NREWFEGFMT TRAQALGLPI VKIMRGPNEV VARANIDVLK QTRLPSAAAF
EDAAKSSDPI CLLPNEGRVF AALMRMPAYD NAVLLVQREV SQLAIDFPGV ARAAAAEYLT
FDELRRYVQI AFASVFILIA LITLLSAVWF GLNFANRFVA PIRRLINAAD EVAAGNFYAR
VPARKSDGDL AHLGESFNTM TQELRRQHDG LRAANDLIDR RRRFTEAVLS GVSPGVLGVD
ADGVITIANP GAERTLGLTA KELVGQPLTN VVPEIAALFP EAEGRHRALQ QQIQLVRGGR
ERTIAVRVTS EQAQGEARGY VVTLDDITDL VTAQRTSAWA DVARRIAHEI KNPLTPIQLS
AERIRRKYGK VITTDKDVFE QCTATIVRQV DEIKRMVDEF SSFARMPKPA ITQQDLTEIA
RQNLFMLRMA HPDLDFPFET VGADEKGRVV AAFDVRLFSQ ALTNILKNAV EAVQAVPEDV
LTADGGKGRV ALTLVVEEVF VVIEVTDNGK GFPAEGRQRL LEPYMTTREG GTGLGLAIVS
KVLEEHGGGI ELNDNPEGRG GQVRMRLPRE VGRPDERNSG TGAGQERDRS AAPGARDRTT
MDKNTEDAME ARRVAEVQP