Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_2822 |
Symbol | |
ID | 5834428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 3162004 |
End bp | 3164403 |
Gene Length | 2400 bp |
Protein Length | 799 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641368623 |
Product | PAS sensor protein |
Protein accession | YP_001640283 |
Protein GI | 163852240 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.354635 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCTGC TGTCGCGACG TTCTGAAAAC GTGCCGTTCG ATGCCCCGTC CCCCGAGGAC GGCGCCGAGG CGGTCGCGCG CCGGTTCGAC TCACCCCCGC GCGGGCCGGG CTGGATCGGG GCGGCGGTGG TGCTCACGGC GCTGATTTCC GCCTCGGTGA CCTTCCTCAT CCTCGCCGGC ATCATCCAGA TCACGCGGAC GCCGACGACC GGCGTGGCCT TGCTCTCGGT CAACGCCGCG CTGGTTCTCG CGCTGGTCGT CGTGATCGCC TGGGAGGCGC GGGTCTTCCT GCATGCCCGG CGCACCCACG CCTCGGTGGC GCGGCTGCAC ACCCGAATCG TCGGCCTGTT CAGCCTGATC GCGATCCTGC CGACGATCCT GCTCGCCATC GTCGCCTCGG TGACGATCGA TGTCGGCCTG TCGCTCGGCT TCACCGACCG CGTCCGCGAC GTGGTGCTGA AATCGGTGCA GGTCGCGGAC GCCTATCAGG AGAATCACTG CCAATCGCTC GCCCGCGAAA TCCGCATCTT CGCCGACGAC TTGACGCGGG CGCGGCCGAA TTTCGATGTG AACCGCGAGT GGTTCGAGGG CTTCATGACC ACCCGCGCCC AGGCGCTCGG CCTGCCGATC GTCAAGATCA TGCGCGGGCC GAACGAGGTG GTGGCGCGCG CCAATATCGA TGTGCTCAAG CAGACGCGCC TGCCCTCGGC CGCCGCCTTC GAGGACGCGG CGAAGTCGAG CGACCCGATC TGCCTGCTGC CGAACGAGGG CCGTGTCTTC GCCGCCCTGA TGCGGATGCC GGCCTACGAC AACGCCGTGT TGCTGGTGCA GCGTGAGGTG AGCCAGCTCG CCATCGACTT TCCCGGCGTC GCCCGCGCCG CGGCGGCCGA GTACCTGACC TTCGACGAAC TGCGCCGCTA CGTGCAGATC GCCTTCGCCT CGGTCTTCAT CCTGATCGCC CTGATCACGC TGCTCTCGGC GGTCTGGTTC GGGCTGAACT TCGCCAACCG TTTCGTCGCC CCGATCCGTC GGCTCATCAA CGCCGCCGAC GAGGTGGCCG CGGGCAATTT CTACGCCCGC GTTCCGGCCC GCAAATCCGA CGGCGACCTC GCCCATCTCG GCGAGAGCTT CAACACGATG ACGCAGGAGC TGCGCCGCCA GCACGATGGC TTGCGCGCGG CCAACGACCT GATCGACCGC CGCCGCCGCT TCACCGAGGC CGTGCTGTCG GGTGTTTCGC CTGGCGTGCT CGGCGTGGAT GCCGACGGCG TCATCACCAT CGCCAATCCC GGCGCCGAGC GGACGCTGGG CCTCACGGCC AAGGAGCTCG TCGGGCAGCC TTTGACGAAT GTCGTGCCGG AGATCGCCGC TCTGTTCCCG GAAGCCGAGG GGCGCCACCG CGCGCTGCAG CAGCAGATCC AGCTCGTACG CGGCGGCCGC GAGCGCACGA TTGCCGTCCG CGTCACGAGC GAGCAGGCGC AGGGCGAGGC GCGCGGCTAC GTCGTGACGC TCGACGACAT CACCGATCTC GTCACGGCGC AGCGCACCTC GGCCTGGGCC GACGTCGCCC GCCGCATCGC CCACGAGATC AAGAACCCGC TGACCCCGAT CCAGCTCTCG GCCGAGCGCA TCCGGCGCAA GTACGGAAAA GTGATCACGA CCGACAAGGA CGTGTTCGAG CAGTGCACCG CCACGATCGT GCGGCAGGTG GACGAGATCA AGCGGATGGT GGACGAGTTC TCCTCCTTCG CCCGGATGCC GAAGCCCGCG ATTACGCAGC AGGATCTGAC CGAGATCGCG CGCCAGAACC TGTTCATGCT GCGCATGGCG CATCCCGACC TCGATTTCCC CTTCGAGACG GTCGGTGCCG ACGAGAAGGG CCGCGTCGTC GCCGCCTTCG ACGTGCGGCT GTTCTCCCAG GCGCTCACCA ACATCCTCAA GAACGCCGTC GAGGCGGTTC AGGCGGTTCC GGAGGACGTG CTGACGGCCG ATGGCGGCAA GGGTCGGGTC GCCCTGACGC TGGTCGTCGA AGAGGTCTTC GTGGTGATCG AAGTCACCGA TAACGGAAAA GGCTTTCCGG CAGAGGGGCG CCAGCGCTTG CTCGAACCCT ATATGACGAC CCGCGAGGGC GGGACCGGCC TCGGACTCGC GATCGTTTCC AAGGTGCTCG AAGAGCATGG CGGGGGGATC GAGCTGAACG ACAACCCGGA GGGGCGCGGC GGACAGGTCC GCATGCGGCT GCCGCGGGAA GTCGGACGGC CGGACGAACG GAATTCCGGG ACCGGTGCGG GACAGGAGCG GGATCGCTCC GCGGCACCGG GCGCGCGTGA CAGGACAACG ATGGATAAGA ATACGGAGGA CGCCATGGAA GCGCGACGCG TCGCGGAGGT GCAGCCATGA
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Protein sequence | MPLLSRRSEN VPFDAPSPED GAEAVARRFD SPPRGPGWIG AAVVLTALIS ASVTFLILAG IIQITRTPTT GVALLSVNAA LVLALVVVIA WEARVFLHAR RTHASVARLH TRIVGLFSLI AILPTILLAI VASVTIDVGL SLGFTDRVRD VVLKSVQVAD AYQENHCQSL AREIRIFADD LTRARPNFDV NREWFEGFMT TRAQALGLPI VKIMRGPNEV VARANIDVLK QTRLPSAAAF EDAAKSSDPI CLLPNEGRVF AALMRMPAYD NAVLLVQREV SQLAIDFPGV ARAAAAEYLT FDELRRYVQI AFASVFILIA LITLLSAVWF GLNFANRFVA PIRRLINAAD EVAAGNFYAR VPARKSDGDL AHLGESFNTM TQELRRQHDG LRAANDLIDR RRRFTEAVLS GVSPGVLGVD ADGVITIANP GAERTLGLTA KELVGQPLTN VVPEIAALFP EAEGRHRALQ QQIQLVRGGR ERTIAVRVTS EQAQGEARGY VVTLDDITDL VTAQRTSAWA DVARRIAHEI KNPLTPIQLS AERIRRKYGK VITTDKDVFE QCTATIVRQV DEIKRMVDEF SSFARMPKPA ITQQDLTEIA RQNLFMLRMA HPDLDFPFET VGADEKGRVV AAFDVRLFSQ ALTNILKNAV EAVQAVPEDV LTADGGKGRV ALTLVVEEVF VVIEVTDNGK GFPAEGRQRL LEPYMTTREG GTGLGLAIVS KVLEEHGGGI ELNDNPEGRG GQVRMRLPRE VGRPDERNSG TGAGQERDRS AAPGARDRTT MDKNTEDAME ARRVAEVQP
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