| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2817 |
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| Symbol | |
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| ID | 5831920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 3155069 |
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| End bp | 3156403 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641368618 |
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| Product | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| Protein accession | YP_001640278 |
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| Protein GI | 163852235 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.288222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.315391 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACC AAGCCGCGCG GCCGCCCGGG CAGGAGCCGG GGAATAAATC GGCGGCGGCG
GTCGTGGTCG CGGCCGGCAA GGGGCTGCGT GTCGGCGGCG ACTTACCCAA GCAATACCGC
CGCGTCGGCG GCCGGGCCGT CCTGACGCGG ACGCTTGCGG CGCTGGCGCA ATCGCCCCGC
ATCACCCGCA TCCAGCCGGT GATCGCGCCG GATGCGCAGG ACTTCTATCG CGAATGCCTC
GCCGATCTCG CGCCTGCCCA TCGTGAAAAG CTCGCCGAGC CGGTGCCGGG CGGGGCGACG
CGCCAGCAAT CGGTGGCGGC CGGGCTCGAA GGGCTCGCCC GCTTAGGCGC GCCCGATCTC
GTGCTCGTCC ACGACGCGGC GCGGCCCTTC GTGGACGAGG CGCTGATCGC CCGCGCGATC
GCGGCCGGCT CCGAGCACGG CGCATCGGTG CCGGGCATCG CGGTCTCCGA CACGATCAAG
CTCGTGGAGG AGATCGCGCC GGGCATCGGC CGCGTCCACG AGACCCCGGC GCGTGAAAAT
CTCCGCGCGG TGCAGACGCC GCAGAGCTTC CGTTTCGGCC TGCTTCTCGA CGCGCATCGC
CGAGCCGTCG CCGAGGGCCG CGACGGCTTC ACCGATGACG GGGCGCTCGC TGAATGGGCC
GGGCTGCCGG TCGTGGTGTT CGAGGGCGAC GCCCGCAACC GCAAGATCAC TCAGGCTGCC
GACCTGATCG AGGCCGACCG GGCATTCTCC GGACGGGCTT TCTCTGAACC TGCGGCCGCG
ATATCGGATG ACACCATGAC CACTTACGTA ACCCGCCTCG GCACCGGCTT CGACGTCCAC
GCCTTCACGG AGGGCGACCA TGTCTGGCTC GGCGGCGTGA AGATCCCCGC CGACCGCGGC
GTGCTCGCCC ATTCCGACGG CGACGTGGCG CTGCACGCCC TCACCGACGC GCTGCTCGGC
GCCATCGCCG ACGGCGACAT CGGCACGCAC TTCCCGCCCT CGGACGAGAA GTGGCGCGGC
GCGGCCTCCG ATCAGTTCCT GGCCCATGCC TGCGAATTGG TGCGGGCGCG CGGCGGCAAG
ATCGACCATC TCGACATCAC GGTGCTGGCG GAAGCCCCGC GCATCGGCCA GCACCGCGAG
GCGATCCGCG CGCGTATCGC CGCGATCGCC GGCGTGCCGC TGTCCTCGGT GTCGATCAAG
GCGACCACGA CCGAAAAGCT TGGCTTCGTC GGTCGCGCCG AGGGCCTCGC TGCCCAGGCC
GCCGCGACGG TGCGGCTGCC GGAGGTCTGC GCGGAGCTGG AGACCGAGGC GGAGACCAAC
GAGCGCCGTT CGTGA
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| Protein sequence | MSDQAARPPG QEPGNKSAAA VVVAAGKGLR VGGDLPKQYR RVGGRAVLTR TLAALAQSPR
ITRIQPVIAP DAQDFYRECL ADLAPAHREK LAEPVPGGAT RQQSVAAGLE GLARLGAPDL
VLVHDAARPF VDEALIARAI AAGSEHGASV PGIAVSDTIK LVEEIAPGIG RVHETPAREN
LRAVQTPQSF RFGLLLDAHR RAVAEGRDGF TDDGALAEWA GLPVVVFEGD ARNRKITQAA
DLIEADRAFS GRAFSEPAAA ISDDTMTTYV TRLGTGFDVH AFTEGDHVWL GGVKIPADRG
VLAHSDGDVA LHALTDALLG AIADGDIGTH FPPSDEKWRG AASDQFLAHA CELVRARGGK
IDHLDITVLA EAPRIGQHRE AIRARIAAIA GVPLSSVSIK ATTTEKLGFV GRAEGLAAQA
AATVRLPEVC AELETEAETN ERRS
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