| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2816 |
|---|
| Symbol | |
|---|
| ID | 5831919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 3154545 |
|---|
| End bp | 3155072 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641368617 |
|---|
| Product | CinA domain-containing protein |
|---|
| Protein accession | YP_001640277 |
|---|
| Protein GI | 163852234 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1546] Uncharacterized protein (competence- and mitomycin-induced) |
|---|
| TIGRFAM ID | [TIGR00199] competence/damage-inducible protein CinA C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.242047 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGAAG ACGCCGCTTT GCTGGCCCGC GCCGAGGCGC TGGTGCGGGT CTATGCGGCG
GCGGGCCAAC GCATCGCGAC CGCCGAGTCC TGCACCGGCG GTCTCGTAGC CGGGCTGCTC
ACGGCAGTGC CCGGTTCCTC GGCGGTGGTG GAGCGCGGCT TCGTCACCTA TTCCAACGAG
GCAAAGGCCG AGGCGATCGG CGTGCCGATG GACCTCATCG CGGCGCATGG CGCGGTGAGC
GAGCCGGTGG CCCGCGCGAT GGCGGTCGGC GCGCTCGCAG CGTCACACGC GGACGTGGCG
GTCTCCGTCA CCGGCATTGC CGGGCCGGGC GGTGGCAGCG ACGCCAAGCC GGTCGGCCTC
GTGCATTTCG GGCTCGCCGT GAAGGACGGC CCCACCCGCC ACGCCGAGCG CCGCTTCGGC
GATCTTGGCC GGGCTGAGAT CCGGCGGTTG TCGGTGGCGG AGGCGCTGAC GCTTCTGGAA
TCCGTCGATT TGCATCGCTC CGGCTCACCA TCAGGCGAAA CCATCTGA
|
|---|
| Protein sequence | MIEDAALLAR AEALVRVYAA AGQRIATAES CTGGLVAGLL TAVPGSSAVV ERGFVTYSNE
AKAEAIGVPM DLIAAHGAVS EPVARAMAVG ALAASHADVA VSVTGIAGPG GGSDAKPVGL
VHFGLAVKDG PTRHAERRFG DLGRAEIRRL SVAEALTLLE SVDLHRSGSP SGETI
|
|---|
| |