Gene Mext_2777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_2777 
Symbol 
ID5830972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3116441 
End bp3117112 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content69% 
IMG OID641368578 
Producthypothetical protein 
Protein accessionYP_001640239 
Protein GI163852196 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0421] Spermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.565366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGT GGGTGCACCT CGAAACCAGC GACGTGCCCG GCGGCGGCAA GAGCCTCGCT 
TTGATGCAGC GCGGCGGTGA ATTCTCCATC GTCGTCGGCA ACATCGAATT GATGAACAGC
ACGCGCGGCA CCTCGGAGGA GGCGCTGGCG TCGCTGACCT GCGCCCGGCT GACGGGCCGG
CCGGCGCCGC GCATCCTGAT CGGCGGTCTC GGCATGGGCT TTACGCTGCG CGCCGCTTTG
CGGGAGTTGG GACCGGACGC GCGCATCGTC GTCGCCGAAC TCGTGCCGGC GGTGGCCGCC
TGGGCACGCG GACCGCTCGC TTCCATCTTC GCTGGCTGCC TCGACGATCC GCGCGTCGAG
CTGCGCGAGA CGGACGTGAC CCGCCTGATC CAGTCCGAGG CCGCCGGGTG GGATGCGATC
CTCTTGGATG TGGATAACGG CCCCGAGGGT CTGCTGCGGC GCGCGAACAA CCGGCTCTAC
GACGAGTGGG GCCTGAAGCG GGCGCAATGG GCGCTCAAGC CCGGCGGCAC GCTCGGGGTG
TGGTCGGGGA CGCCGGACCG AAAGTTCAAG GCACGGCTTC AGCGGCTGGG TTTCGCCGTC
GAGGAGGTTC GCCGGCCAGC CAGCGGTTCG AGCGGACCCC GCCATGTCAT CTGGCTTGCA
ACGCAGCCCT GA
 
Protein sequence
MNEWVHLETS DVPGGGKSLA LMQRGGEFSI VVGNIELMNS TRGTSEEALA SLTCARLTGR 
PAPRILIGGL GMGFTLRAAL RELGPDARIV VAELVPAVAA WARGPLASIF AGCLDDPRVE
LRETDVTRLI QSEAAGWDAI LLDVDNGPEG LLRRANNRLY DEWGLKRAQW ALKPGGTLGV
WSGTPDRKFK ARLQRLGFAV EEVRRPASGS SGPRHVIWLA TQP