Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_2777 |
Symbol | |
ID | 5830972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 3116441 |
End bp | 3117112 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641368578 |
Product | hypothetical protein |
Protein accession | YP_001640239 |
Protein GI | 163852196 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0421] Spermidine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.565366 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAGT GGGTGCACCT CGAAACCAGC GACGTGCCCG GCGGCGGCAA GAGCCTCGCT TTGATGCAGC GCGGCGGTGA ATTCTCCATC GTCGTCGGCA ACATCGAATT GATGAACAGC ACGCGCGGCA CCTCGGAGGA GGCGCTGGCG TCGCTGACCT GCGCCCGGCT GACGGGCCGG CCGGCGCCGC GCATCCTGAT CGGCGGTCTC GGCATGGGCT TTACGCTGCG CGCCGCTTTG CGGGAGTTGG GACCGGACGC GCGCATCGTC GTCGCCGAAC TCGTGCCGGC GGTGGCCGCC TGGGCACGCG GACCGCTCGC TTCCATCTTC GCTGGCTGCC TCGACGATCC GCGCGTCGAG CTGCGCGAGA CGGACGTGAC CCGCCTGATC CAGTCCGAGG CCGCCGGGTG GGATGCGATC CTCTTGGATG TGGATAACGG CCCCGAGGGT CTGCTGCGGC GCGCGAACAA CCGGCTCTAC GACGAGTGGG GCCTGAAGCG GGCGCAATGG GCGCTCAAGC CCGGCGGCAC GCTCGGGGTG TGGTCGGGGA CGCCGGACCG AAAGTTCAAG GCACGGCTTC AGCGGCTGGG TTTCGCCGTC GAGGAGGTTC GCCGGCCAGC CAGCGGTTCG AGCGGACCCC GCCATGTCAT CTGGCTTGCA ACGCAGCCCT GA
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Protein sequence | MNEWVHLETS DVPGGGKSLA LMQRGGEFSI VVGNIELMNS TRGTSEEALA SLTCARLTGR PAPRILIGGL GMGFTLRAAL RELGPDARIV VAELVPAVAA WARGPLASIF AGCLDDPRVE LRETDVTRLI QSEAAGWDAI LLDVDNGPEG LLRRANNRLY DEWGLKRAQW ALKPGGTLGV WSGTPDRKFK ARLQRLGFAV EEVRRPASGS SGPRHVIWLA TQP
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