| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2770 |
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| Symbol | |
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| ID | 5831358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 3106320 |
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| End bp | 3108209 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641368571 |
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| Product | PAS sensor protein |
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| Protein accession | YP_001640232 |
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| Protein GI | 163852189 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCACAT CTGTGCCGGG AGCGCCCTCG GGTTACGGCC CTGCCTTCGA TGAGAATCGC
GAGGCGATGC TGGTGTTCGA GCCCCTGACG GACCGCATCG ATGATGCCAA TGCGGCGGCT
GCCCGGTTGC TCGGCCACGA CCGCGCGGCC CTGCGAGCGA CGCCCGTGAG CGCCCTGCAT
CCCGACCAGC GGCCTGCGCT CGTGGTGTTC ACCCAGGCCG TCCTCGCCGA GGGGCAATGG
TGGACACAAG GACTTACGCC GCGCCACGGC GCCGGTAAGC TGTTGCGCCT CGAATATGCC
GGCTGCGTGC TCTCAGGCGA GCCGAGGCGG CTCCTCGTCA CCCTCTTCGA TCTCGATGAG
CGCCAGCGCC GCCGCATCGA CCGGGAGGCC GAGGCGCACA TGCGCGCCGG CCTGCCCGAA
TGGCAGCGCA TGGAGCGCAT CTTTCGCGAC ATCGAGCGCG GCAACCGGCT GATCCTGCGC
GCGGCGGGGG AGGGGATCTA CGGCGTCAAC GCGGACGGGA TCACCACCTT CGTCAACCCG
GCCGCGGAGC GGATGCTGGG ATGGGCCTCG GCCGATCTCG TCGGCAAGGA CATGCACGCC
ACCGTGCACC ATACCCACGC GTGGGGTGCG CATTACCCAC ATCACGACTG CCCGATCTAC
GCAGCCTTCC GCGACGGGGC CGTTCATCAG GTCGATGGCG AGGTGTTCTG GCGCAAGGAC
GGCACCTGCT TTCCGGTCGA GTACACCTCG ACGCCGATCC GCGAGGGCGG GCAATTGCTC
GGCGCGGTGA TCGTGTTTCG CGATGTCAGC CAGCGCCGTG AGGACGAGGA CCGGTTGCGG
GCCGCACTCG CCGAAGTCGA TTCCCTGCGC GAGCGCCTGG AGCAGGAGAA CGCCTACCTG
AAGGAGGAAA TTCGCGCCGA GAGCCACCAT CAGGGCATCA TCGGGCGTAG CCCGGTCATG
GAGGCGTTGC TGCGCCAGAT CGACGTTGTG GCGGGCACCG ATGCCACGGT TCTCGTCACC
GGCGAATCCG GCACCGGGAA GGAGTTGATC GCCCGGGCCA TCCACGAGGC GAGCCGCCGC
CGCGAGCGGC CGCTGATCCG CGTGAACTGC GCGGCGATCC CGCGCGACCT GTTCGAGAGC
GAGTTCTTCG GCCACGCCAA GGGCGCGTTC ACCGGGGCGC TGCGCGATCG GATCGGGCGC
TTCGAACTCG CCGACGGCGG CACGCTGTTC CTCGACGAGG TTGGGGAGAT CCCGCTCGAC
CTCCAGGGCA AGCTGCTGCG TGTCCTGCAA GAGCGCCAGT TCGAGCGGGT CGGCGAGGAG
CGCACCCGCG CCGTCGATAT CCGGCTGATC GCCGCGACCA ACCGCGACCT CAAGGAAGAG
GTGCGCCGCG GACGTTTTCG CGAGGATCTC TACTTCCGCC TCAACGTCTT CCCCCTGACC
TCCGCGCCCC TGCGGGAGCG CCGCGAGGAC GTGCCGCTGA TCGCGCAGCA CGTCCTGAAG
GCCGCCGCGC GGCGCCTCAA CCGGACGGAT CTGCGCCTGA CCGAGGCCGA TGCCCGCCGC
CTGTCCCGCT ACGATTGGCC GGGCAACGTG CGCGAGTTGG AGAACGTGAT CGAGCGCGCC
GCGATTCTCG CCGAGCGTGG GCGGCTGCGC TTCGATTTGC CGGAAGCCCG CAGCACCGGT
CCCGTCACGC CCGCGCCGGA GCGTCCGGCG GATCTCGGCC GGCCGCTATC CGAAGAGGAG
CGCCGCGCCC GTGCCCGCAG CGAAATCGAG GCGGCGCTTC ACATCAGCGG CGGAAAGGTC
TTCGGTTCCG GCGGCGCGGC CGAGTTGCTC GGACTCAAGC CGACGACGTT GCGCTCGCGG
ATGAAGGTGC TGGGGATCGA ACCGCTCTGA
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| Protein sequence | MSTSVPGAPS GYGPAFDENR EAMLVFEPLT DRIDDANAAA ARLLGHDRAA LRATPVSALH
PDQRPALVVF TQAVLAEGQW WTQGLTPRHG AGKLLRLEYA GCVLSGEPRR LLVTLFDLDE
RQRRRIDREA EAHMRAGLPE WQRMERIFRD IERGNRLILR AAGEGIYGVN ADGITTFVNP
AAERMLGWAS ADLVGKDMHA TVHHTHAWGA HYPHHDCPIY AAFRDGAVHQ VDGEVFWRKD
GTCFPVEYTS TPIREGGQLL GAVIVFRDVS QRREDEDRLR AALAEVDSLR ERLEQENAYL
KEEIRAESHH QGIIGRSPVM EALLRQIDVV AGTDATVLVT GESGTGKELI ARAIHEASRR
RERPLIRVNC AAIPRDLFES EFFGHAKGAF TGALRDRIGR FELADGGTLF LDEVGEIPLD
LQGKLLRVLQ ERQFERVGEE RTRAVDIRLI AATNRDLKEE VRRGRFREDL YFRLNVFPLT
SAPLRERRED VPLIAQHVLK AAARRLNRTD LRLTEADARR LSRYDWPGNV RELENVIERA
AILAERGRLR FDLPEARSTG PVTPAPERPA DLGRPLSEEE RRARARSEIE AALHISGGKV
FGSGGAAELL GLKPTTLRSR MKVLGIEPL
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