| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2739 |
|---|
| Symbol | |
|---|
| ID | 5831537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 3068384 |
|---|
| End bp | 3070132 |
|---|
| Gene Length | 1749 bp |
|---|
| Protein Length | 582 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641368539 |
|---|
| Product | type I secretion system ATPase |
|---|
| Protein accession | YP_001640201 |
|---|
| Protein GI | 163852158 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
|---|
| TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAACG TTAGGCACGA AAAGAACGAG ATCGCCGCCG CTTTGGCGCG ATGCAAGACG
GCCTTCATCG GCGTGGCCGT GATGAGCGGG CTGGTGAACA TTCTCTATCT CACCGGTTCG
TTCTTCATGC TCGAGGTCTA CGACCGGGTG ATCCCGAGCC GTTCGGTACC GACCCTGATC
GGCCTCGCGG CCCTCGCCCT CGTGCTCTAC GCGTTCCAGG GCGTGCTCGA AGCCCTCCGC
GGCCGGATCC TCGCCCGTGT CGGCGCTGCC CTCGACGAGG CCTTGAGCGG GCGGGTGTTC
GATCTCGTGG TGCGTGCGCC GCTCAAAGGC ACGACCCAGG GCGATGGCCT TCTGCCCCTG
CGCGACCTCG ATCAGCTCCG CGCGTTCCTG TCCGGTTCCG GTCCTTCCGC CTTTTTCGAT
CTGCCCTGGA TGCCGGTCTA TTTGCTGATC TGCTTCCTGT TTCACCCGCT GATCGGTGTC
GCCGCCCTCG TCGGCATGGG CATTCTCGCC GCCCTGACCT TCATGACCGA CCGCGCCAGC
AAGGGTCCGA CGCGGGCTGC GACCGGCCAC GGCATGCGCC GCAACGGTCT GGCCGAAGCC
GGCCGCCGCA ACGCCGAGGT GCTGGCCGCG ATGGGCATGC AGGAGCGGCT CGCCGCTCGC
TGGGCCGGGG CCAACCGCGA ATACATGGAG GCGCATCAGG CCGTGTCGGA TGCCGGCAGC
GGCTACGGTG CCGGTTCCAA GGTGTTCCGC ATGGCCCTGC AATCGGGCGT GCTCGCGCTC
GGCGCCTGGC TCGTCATCCA TAACGAGGCC AGCGCCGGCG TCATCATCGC GAGCTCGATC
CTCGTCTCCC GTGCGCTCGC GCCCGCGGAA CTCACCATCG CCAACTGGAA GGGCTTCGTC
GCCGCGCGGC AAAGCTGGCA TCGGCTGTCG GAGCTGCTGG CCCGGCTGCC TCAGACCGAG
CGTCCGCACG CGCTGCCGGC GCCGAGCGAG ACCATCTCCG TCGAGGGTGC CAGCATCGCC
CCCCCCGGCA CGCCGCGGCT CGTGGTGCAG GATGTGAGCT TCGGCCTCAG AGCGGGGCAG
GGGCTCGGCA TCATCGGCCC CTCGGCCTCC GGCAAGTCTT CCCTCGTGCG AGCCCTTGTC
GGCGTCTGGC CGCCGATCCG CGGAAAGGTC CGGTTCGACG GTGCCGCCCT GGATCAATGG
ACGAGCGGCG ACCTCGGCCC GCATATCGGC TTCCTGCCGC AAGAGGTCGA ACTCTTCGCC
GGCAGCGTGG CCGAGAACAT CGCCCGGTTC GAGCCGGGCG CGCCGGCCGA GGCCATCATC
GCGGCGGCCA AGGCCGCCGA GGTCCACGAG CTGATCCTGC GGCTGCCGGA AGGCTACGAC
ACCCGCATCG GCGAGGGCGG CGCGGGTCTG TCCGCCGGGC AGCGCCAGCG CGTCGGGCTC
GCCCGCGCGC TCTACCGCGA GCCCTTCCTC GTGGTGCTCG ACGAGCCCAA CGCCAATCTC
GATGCCGAGG GTGAGAACGC CCTGACCCAG GCGATCCTCG GCGTACGGCA GCGCGGCGGC
ATCTGCGTCG TCGTCGCCCA CCGGCCGAGC GCGCTTGCCG GCCTCGACCT GATCCTGATG
ATGGCCGATG GCCGCGTCCA GGCCTTCGGG CCCAAGGACG AGATCCTCAA GCGCGTGCTG
CGCCCGGCGC CGGCCCCCAT TCCGGCCGCC GCCGAGCCCG CCGTGCCCTC GATCCGTGAG
AGTGCCTGA
|
|---|
| Protein sequence | MVNVRHEKNE IAAALARCKT AFIGVAVMSG LVNILYLTGS FFMLEVYDRV IPSRSVPTLI
GLAALALVLY AFQGVLEALR GRILARVGAA LDEALSGRVF DLVVRAPLKG TTQGDGLLPL
RDLDQLRAFL SGSGPSAFFD LPWMPVYLLI CFLFHPLIGV AALVGMGILA ALTFMTDRAS
KGPTRAATGH GMRRNGLAEA GRRNAEVLAA MGMQERLAAR WAGANREYME AHQAVSDAGS
GYGAGSKVFR MALQSGVLAL GAWLVIHNEA SAGVIIASSI LVSRALAPAE LTIANWKGFV
AARQSWHRLS ELLARLPQTE RPHALPAPSE TISVEGASIA PPGTPRLVVQ DVSFGLRAGQ
GLGIIGPSAS GKSSLVRALV GVWPPIRGKV RFDGAALDQW TSGDLGPHIG FLPQEVELFA
GSVAENIARF EPGAPAEAII AAAKAAEVHE LILRLPEGYD TRIGEGGAGL SAGQRQRVGL
ARALYREPFL VVLDEPNANL DAEGENALTQ AILGVRQRGG ICVVVAHRPS ALAGLDLILM
MADGRVQAFG PKDEILKRVL RPAPAPIPAA AEPAVPSIRE SA
|
|---|
| |