Gene Mext_2674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_2674 
Symbol 
ID5835178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp2987253 
End bp2988815 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content68% 
IMG OID641368474 
Product2-isopropylmalate synthase 
Protein accessionYP_001640136 
Protein GI163852093 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID[TIGR00973] 2-isopropylmalate synthase, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.151029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.154507 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAACA CGACTCAGAG CGCGAAGGAC CGCGTCGTCA TCTTCGACAC GACGTTGCGC 
GACGGCGAGC AATGTCCCGG CGCCACCATG ACGCTCGACG AGAAGTTGGC GGTGGCCGAA
CTGCTCGACG GGATGGGCGT CGACATCATC GAGGCCGGCT TCCCCATCGC CTCCAACGGT
GACTTCGAGG CGGTCTCCGA GATCGCGCGG CGCACCAAGC GGGCGACCGT GGCGGGCCTC
GCCCGCGCCA TCCCCGCTGA CATCGCCCGG GCGGGCGAGG CGGTGCGGCA CGCCGAGCGC
GGCCGTATCC ACACCTTCGT CTCGACCTCG GCGATCCACC TCGCCCACCA GATGCGCAAG
ACGCAGGACG AGGTGATCGA GATCATCCTC AAGACCGTGG CCCAGGCCCG CGACCTCGTC
GAGGACGTGG AATGGTCGGC CATGGACGCG ACCCGGACCG ACATCGACTA TCTCTGCCGC
TGCGTCGAGG CGGCGATCCG CTCGGGCGCC ACCACCATCA ACCTGCCCGA CACCGTGGGC
TACGCCACGC CGCAGGAATA CGGCGCGATG TTCCGCCAAG TCCGCGAGCG CGTACCGAAC
GCCGATCAGG CGATCTTCTC CGTGCATTGC CACAACGATC TCGGGCTGGC GGTGGCGAAC
TCGCTCGCCG GCCTGGAGGG CGGTGCCCGG CAGATCGAGT GCACGGTCAA CGGCATCGGC
GAGCGCGCCG GCAACGCGGC GCTCGAAGAG ATCGTCATGG CGATCCGCAC CCGCGCCGAC
GTGATGCCCT ACGACACCGG CATCGACTCG ACGATGCTGA CCCGCGCCTC GAAGCTCGTC
AGCCACGCGG CGAACTTCCC CGTGCAGTAC AACAAGGCCA TCGTCGGCCG GAACGCCTTC
GCCCACGAGA GCGGCATCCA TCAGGACGGC ATGCTCAAGC ATTCCGAGAC CTACGAGATC
ATGACTCCGG CCTCGGTCGG GCTCGCCAAG ACCTCGCTGG TGATGGGCAA GCATTCGGGT
CGGGCGGCGT TCAAGTCGAA GCTCGGCGAG CTCGGCATCT CGCTGTCCGA CAACCAGTTC
CAGGACGTGT TCGAGCGCTT CAAGGCCTTG GCCGACCGCA AGAAGCACGT CTACGACGAG
GATATCGAGG CGCTGGTGGA CGAGAAGCGC GCCACCGCCC ACGACCGCAT CAAGCTCGTC
TCCCTGTCGG TGATCGCCGG CACGCGGGGC CCGCAGCGCG CGACGATGAA GATCGAGATG
GACGGCCGCA TCTTCACCGC GGAGGCCGAT GGCAACGGCC CGGTGGACGC GGTCTTCAAC
GCGATCCACG AGATCGTCCC GCACGACGCG GTGCTCGAAC TCTATCAGGT CCACGCCGTG
ACCGAGGGCA CCGACGCCCA GGCCGAAGTC TCGGTCCGGC TGAAGGCCGG AGAGCGCTCG
GTCACGGCGC GCGGTGCCGA CCCGGACACG CTGGTGGCCT CGGCCAAGGC GTATCTCTCG
GCGCTCAACA AACTCTCGGC GGCCTCCGTA CGGCTGCACG CGCAGCACGC TGCGGTGGTC
TAG
 
Protein sequence
MANTTQSAKD RVVIFDTTLR DGEQCPGATM TLDEKLAVAE LLDGMGVDII EAGFPIASNG 
DFEAVSEIAR RTKRATVAGL ARAIPADIAR AGEAVRHAER GRIHTFVSTS AIHLAHQMRK
TQDEVIEIIL KTVAQARDLV EDVEWSAMDA TRTDIDYLCR CVEAAIRSGA TTINLPDTVG
YATPQEYGAM FRQVRERVPN ADQAIFSVHC HNDLGLAVAN SLAGLEGGAR QIECTVNGIG
ERAGNAALEE IVMAIRTRAD VMPYDTGIDS TMLTRASKLV SHAANFPVQY NKAIVGRNAF
AHESGIHQDG MLKHSETYEI MTPASVGLAK TSLVMGKHSG RAAFKSKLGE LGISLSDNQF
QDVFERFKAL ADRKKHVYDE DIEALVDEKR ATAHDRIKLV SLSVIAGTRG PQRATMKIEM
DGRIFTAEAD GNGPVDAVFN AIHEIVPHDA VLELYQVHAV TEGTDAQAEV SVRLKAGERS
VTARGADPDT LVASAKAYLS ALNKLSAASV RLHAQHAAVV