Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_2674 |
Symbol | |
ID | 5835178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 2987253 |
End bp | 2988815 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641368474 |
Product | 2-isopropylmalate synthase |
Protein accession | YP_001640136 |
Protein GI | 163852093 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.151029 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.154507 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAACA CGACTCAGAG CGCGAAGGAC CGCGTCGTCA TCTTCGACAC GACGTTGCGC GACGGCGAGC AATGTCCCGG CGCCACCATG ACGCTCGACG AGAAGTTGGC GGTGGCCGAA CTGCTCGACG GGATGGGCGT CGACATCATC GAGGCCGGCT TCCCCATCGC CTCCAACGGT GACTTCGAGG CGGTCTCCGA GATCGCGCGG CGCACCAAGC GGGCGACCGT GGCGGGCCTC GCCCGCGCCA TCCCCGCTGA CATCGCCCGG GCGGGCGAGG CGGTGCGGCA CGCCGAGCGC GGCCGTATCC ACACCTTCGT CTCGACCTCG GCGATCCACC TCGCCCACCA GATGCGCAAG ACGCAGGACG AGGTGATCGA GATCATCCTC AAGACCGTGG CCCAGGCCCG CGACCTCGTC GAGGACGTGG AATGGTCGGC CATGGACGCG ACCCGGACCG ACATCGACTA TCTCTGCCGC TGCGTCGAGG CGGCGATCCG CTCGGGCGCC ACCACCATCA ACCTGCCCGA CACCGTGGGC TACGCCACGC CGCAGGAATA CGGCGCGATG TTCCGCCAAG TCCGCGAGCG CGTACCGAAC GCCGATCAGG CGATCTTCTC CGTGCATTGC CACAACGATC TCGGGCTGGC GGTGGCGAAC TCGCTCGCCG GCCTGGAGGG CGGTGCCCGG CAGATCGAGT GCACGGTCAA CGGCATCGGC GAGCGCGCCG GCAACGCGGC GCTCGAAGAG ATCGTCATGG CGATCCGCAC CCGCGCCGAC GTGATGCCCT ACGACACCGG CATCGACTCG ACGATGCTGA CCCGCGCCTC GAAGCTCGTC AGCCACGCGG CGAACTTCCC CGTGCAGTAC AACAAGGCCA TCGTCGGCCG GAACGCCTTC GCCCACGAGA GCGGCATCCA TCAGGACGGC ATGCTCAAGC ATTCCGAGAC CTACGAGATC ATGACTCCGG CCTCGGTCGG GCTCGCCAAG ACCTCGCTGG TGATGGGCAA GCATTCGGGT CGGGCGGCGT TCAAGTCGAA GCTCGGCGAG CTCGGCATCT CGCTGTCCGA CAACCAGTTC CAGGACGTGT TCGAGCGCTT CAAGGCCTTG GCCGACCGCA AGAAGCACGT CTACGACGAG GATATCGAGG CGCTGGTGGA CGAGAAGCGC GCCACCGCCC ACGACCGCAT CAAGCTCGTC TCCCTGTCGG TGATCGCCGG CACGCGGGGC CCGCAGCGCG CGACGATGAA GATCGAGATG GACGGCCGCA TCTTCACCGC GGAGGCCGAT GGCAACGGCC CGGTGGACGC GGTCTTCAAC GCGATCCACG AGATCGTCCC GCACGACGCG GTGCTCGAAC TCTATCAGGT CCACGCCGTG ACCGAGGGCA CCGACGCCCA GGCCGAAGTC TCGGTCCGGC TGAAGGCCGG AGAGCGCTCG GTCACGGCGC GCGGTGCCGA CCCGGACACG CTGGTGGCCT CGGCCAAGGC GTATCTCTCG GCGCTCAACA AACTCTCGGC GGCCTCCGTA CGGCTGCACG CGCAGCACGC TGCGGTGGTC TAG
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Protein sequence | MANTTQSAKD RVVIFDTTLR DGEQCPGATM TLDEKLAVAE LLDGMGVDII EAGFPIASNG DFEAVSEIAR RTKRATVAGL ARAIPADIAR AGEAVRHAER GRIHTFVSTS AIHLAHQMRK TQDEVIEIIL KTVAQARDLV EDVEWSAMDA TRTDIDYLCR CVEAAIRSGA TTINLPDTVG YATPQEYGAM FRQVRERVPN ADQAIFSVHC HNDLGLAVAN SLAGLEGGAR QIECTVNGIG ERAGNAALEE IVMAIRTRAD VMPYDTGIDS TMLTRASKLV SHAANFPVQY NKAIVGRNAF AHESGIHQDG MLKHSETYEI MTPASVGLAK TSLVMGKHSG RAAFKSKLGE LGISLSDNQF QDVFERFKAL ADRKKHVYDE DIEALVDEKR ATAHDRIKLV SLSVIAGTRG PQRATMKIEM DGRIFTAEAD GNGPVDAVFN AIHEIVPHDA VLELYQVHAV TEGTDAQAEV SVRLKAGERS VTARGADPDT LVASAKAYLS ALNKLSAASV RLHAQHAAVV
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