Gene Mext_2619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_2619 
SymbolrplM 
ID5832361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp2935635 
End bp2936096 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content66% 
IMG OID641368418 
Product50S ribosomal protein L13 
Protein accessionYP_001640082 
Protein GI163852039 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0102] Ribosomal protein L13 
TIGRFAM ID[TIGR01066] ribosomal protein L13, bacterial type 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.161745 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCA CTTCGCTGAA GCCCGCCGAC GTCGACAAGA AGTGGGTCGT GATCGACGCC 
GAGGGCCTCG TCGTGGGCCG TCTCGCTTCG ATCGTGGCGA TGCGTCTGCG CGGCAAGCAC
AAGCCCGCCT ACACGCCCCA CGTCGATTGC GGCGACCACG TCATCGTCAT CAATGCGGAC
AAGGTGAAGT TCACCGGCCG CAAGTACGAC CAGAAGGTCT ACTACCACCA CACGGGCTAT
CCGGGCGGCA TCAAGGAGCG CTCGGCCAAG TTCATCCTCG AGGGCCGGTT CCCCGAGCGC
GTGGTCGAGA AGGCCGTGGA GCGCATGCTG CCGCGCGGCC CGCTCTTCCG CCAGATCCTC
GGCCACCTGC GCGTCTACAA GGGTGCCGCG CATCCCCACG AGGCTCAGCA GCCGCAGGCG
CTCGACGTCG GCTCCCTCAA CCGTAAGAAC GTGAGCGCTT GA
 
Protein sequence
MKTTSLKPAD VDKKWVVIDA EGLVVGRLAS IVAMRLRGKH KPAYTPHVDC GDHVIVINAD 
KVKFTGRKYD QKVYYHHTGY PGGIKERSAK FILEGRFPER VVEKAVERML PRGPLFRQIL
GHLRVYKGAA HPHEAQQPQA LDVGSLNRKN VSA