| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2598 |
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| Symbol | alaS |
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| ID | 5831188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 2913753 |
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| End bp | 2916428 |
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| Gene Length | 2676 bp |
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| Protein Length | 891 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641368397 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001640061 |
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| Protein GI | 163852018 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.695693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCG TCAACGAGAT CCGATCGACC TTCCTGGACT ACTTCCGGGA TGCCGGGCAC
GCGGTGGTAC CCTCGTCCTC GCTCGTGCCG AAGAACGACC CCACGCTGAT GTTCACGAAC
GCCGGCATGG TGCAGTTCAA GAACGTCTTC ACGGGGGTCG AGAAGCGTCC CTACGTCAAG
GCGACCTCTT CGCAGAAATG CGTCCGCGCC GGGGGCAAGC ACAACGACCT CGACAATGTC
GGCTACACCG CGCGGCATCA CACCTTCTTC GAGATGCTCG GCAACTTTTC GTTCGGCGAC
TACTTCAAGG CCGACGCGAT CGAGCTGGCC TGGACGCTGA TCACCAAGGA GTTCGGCCTC
TCGCCGGAAA AGCTCCTCGT CACCGTCTAT GCGGACGACG AGGAGGCCGC GGGCCTGTGG
CGGAAGATCG CCGGCTTCTC GGATGAGAAG ATCATCCGGA TCGGCACCTC CGACAATTTC
TGGCAGATGG GTGATACCGG CCCCTGCGGT CCCTGCTCGG AAATCTTCAT CGACCAGGGC
CCGACGCTCG CGGGCGGACC GCCTGGTTCT CCGGATGAGG ATGGCGACCG CTTCCTCGAA
TTCTGGAACC TCGTGTTCAT GCAGTACGAG CAGGTCGAGC CGGGTGTGCG GAACTCCCTG
CCTCGGCCCT CGATCGATAC CGGCATGGGC CTGGAGCGGA TGGCCGCCAT CCTCCAGGGC
GTCCACTCGA ATTACGACAC CGACCTCTTC CGCGCGCTGA TCGATGCGGT GGCCCACGCC
GTGTCGCGGG CGCCGGAGCC GTCGACGCGC GCCTCCTACC GCGTCATCGC CGACCATCTG
CGCTCGACCT CGTTCCTGAT CGCCGACGGT GTGCTGCCGT CGAACGAGGG CCGCGGCTAC
GTACTGCGCC GGATCATGCG CCGGGCCATG CGCCATCTCG AACTGCTCGG CGCCCGCGAT
CCGGTCATGT ACCGGCTCGT GCCGACCCTC GTGCGCGAGA TGGGGCAGGC CTTCCCCGAA
CTCGCCCGCA GCGAGGCGCT GATCTCCGAG ACCCTCCGGC TGGAGGAAGG CCGCTTCCGC
AAGACCCTGG AGCGCGGCCT CGCCATCCTC GACACCGAGA CCCGCGATCT CGCGGCCGGC
CAGAACCTGT CCGGCGAGAC GGCTTTCACG CTCTACGACA CCTACGGCTT CCCGCTCGAC
CTGACGCAGG ACGCGCTGAA GGCGCGCGGC ATCGGCGTCG ACACGAAGGC CTTCGACGCG
GCGATGCTGC GCCAGAAGCA GGCGGCGCGG GCCGCGTGGC AGGGCTCGGG CGAGGCCGCG
ACCGAGACGG TCTGGTTCGG CATCAAGGAG CGCACCGGCG CCACTGAGTT TCTGGGATAC
GACACGGAAG CGGCCGAAGC CGTCATCGGC GCTCTGCTGC GCGACGGCGC GGAGGTCGAA
ACACTGAAGG CGGGCGAGAA CGGCATCGTC GTCGCCAACC AGACCCCGTT CTACGGCGAA
TCCGGCGGTC AGGTCGGCGA TACCGGCACG ATCTCCGGGC CCGGCCTCAA GGCACGCGTC
ACCGGTACGG AAAAGAAGCT CGGCGACCTG TTCGTGCACC ATGTCACGGT CGAGGAGGGT
ACGCTCGCCG TAGGTGCGGC GGTGGAGCTG AAGGTCGATC ACGCGCGCCG CGCCGCGATC
CGCGCCAACC ACTCGGCGAC CCACCTCCTC CACGAGGCCC TGCGTCAGGT GCTCGGCGAC
CACGTCGCCC AGAAGGGCTC GCTCGTCGCG CCCGAGCGCC TGCGCTTCGA CATCAGCCAC
CCCAAGCCCA TCGACGAGGC GGAGCTGAGC CGCGTCGAGG AGATCGCCAA CGCGGTCCTG
CTCCAGAACG CGCCGGTGGT CACGAAGCTG ATGGCCGTGG ACGAGGCGAT CGAATCGGGC
GCCCGCGCCC TGTTCGGCGA GAAGTACGGC GATGAAGTCC GCGTCGTCTC CATGGGCCGG
CCCGTGGACG ACGAGGGCCG TGAGGTCGAA GGCCGCCTGC CGAACTTCTC GATCGAGCTG
TGCGGCGGCA CCCATGTCTC GCAGCTCGGC GAGATTGGCC AGATCACCGT GCTCGGCGAG
AGCGCGGTCG GCGCCGGCGT GCGCCGGATC GAGGCGATGA CCGGCACCGC CGCCCGTCGC
CACCGCGCCA CCGAGAGCCG CACGCTGAGC CAGCTCGCCG GCCTGCTCAA GGCGCCGGTC
GCGGACGTGC CGGAGCGCCT CTCCACGCTC ATCGAGGAGC GTCGCCGACT CGAAAAGGAG
CTAGCGGATG CGCGCAAGAA GATCGCCATG GGCGGAGCCT CGGGCGGCGG CGACGAAGCC
CGCGAGATCA ACGGCGTGAA GTTGATGGCC CGGGTGGTCG AGGGCGTCGA GATGCGGGAC
CTGAAAGGTC TCGCCGACGA GGGCAAGACC CGCCTCGGCT CCGGCATCGT CGCCCTCGTC
GGCGTCTCGG CGGACGGCAA GGCCGGGCTC GTGGTCGGCG TTACGGAGGA TCTGACCGGG
CGCTACGACG CGGTCGAACT GGTGCGCGCC GGTGCTGGCC ACCTCGGCGG CAAGGGCGGC
GGCGGACGGC GCGACATGGC CCAGGCCGGC GGCCCGGACG GCGCCGGAGC GGACGCCGCG
CTCGCGGCGA TCGCGGAGGC CTTGGCCGCG GGCTGA
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| Protein sequence | MSGVNEIRST FLDYFRDAGH AVVPSSSLVP KNDPTLMFTN AGMVQFKNVF TGVEKRPYVK
ATSSQKCVRA GGKHNDLDNV GYTARHHTFF EMLGNFSFGD YFKADAIELA WTLITKEFGL
SPEKLLVTVY ADDEEAAGLW RKIAGFSDEK IIRIGTSDNF WQMGDTGPCG PCSEIFIDQG
PTLAGGPPGS PDEDGDRFLE FWNLVFMQYE QVEPGVRNSL PRPSIDTGMG LERMAAILQG
VHSNYDTDLF RALIDAVAHA VSRAPEPSTR ASYRVIADHL RSTSFLIADG VLPSNEGRGY
VLRRIMRRAM RHLELLGARD PVMYRLVPTL VREMGQAFPE LARSEALISE TLRLEEGRFR
KTLERGLAIL DTETRDLAAG QNLSGETAFT LYDTYGFPLD LTQDALKARG IGVDTKAFDA
AMLRQKQAAR AAWQGSGEAA TETVWFGIKE RTGATEFLGY DTEAAEAVIG ALLRDGAEVE
TLKAGENGIV VANQTPFYGE SGGQVGDTGT ISGPGLKARV TGTEKKLGDL FVHHVTVEEG
TLAVGAAVEL KVDHARRAAI RANHSATHLL HEALRQVLGD HVAQKGSLVA PERLRFDISH
PKPIDEAELS RVEEIANAVL LQNAPVVTKL MAVDEAIESG ARALFGEKYG DEVRVVSMGR
PVDDEGREVE GRLPNFSIEL CGGTHVSQLG EIGQITVLGE SAVGAGVRRI EAMTGTAARR
HRATESRTLS QLAGLLKAPV ADVPERLSTL IEERRRLEKE LADARKKIAM GGASGGGDEA
REINGVKLMA RVVEGVEMRD LKGLADEGKT RLGSGIVALV GVSADGKAGL VVGVTEDLTG
RYDAVELVRA GAGHLGGKGG GGRRDMAQAG GPDGAGADAA LAAIAEALAA G
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