Gene Mext_2579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_2579 
Symbol 
ID5834903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp2896317 
End bp2896742 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content60% 
IMG OID641368379 
Productlarge conductance mechanosensitive channel protein 
Protein accessionYP_001640043 
Protein GI163852000 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1970] Large-conductance mechanosensitive channel 
TIGRFAM ID[TIGR00220] large conductance mechanosensitive channel protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGAAG AGTTCAAGAA GTTCGCGTTG CGCGGCAATG TGGTCGATCT CGCCGTCGGC 
GTGATCATCG GCGCAGCGTT CGGCGCCATC GTCAATTCGC TGGTTCAGGA CGTTATCATG
CCGATCATCG GCGCGGTGAC CGGCGGGCTC GATTTCTCGA ACTACTACAT CCCGCTGTCC
TCCAAGGTGC AGGACGGCAT GCCCTATGCC GAGGCGAAGA AGGTCGGCGC GGTGATCGGC
TACGGTCAGT TCCTAACGCT CGCCGTCAAT TTCACCATCA TCGCCTTCGT GCTGTTCATG
GTCATCCGCG CCATGAACGT CCTGAAATCC AGGGAAGAGG CCAAGCCAAA GCCGGTGGCC
GAAGTGCCGG CCGATGTGAA GCTGCTGGGT GAAATCCGCG ATCTGCTGGC GGCGCGACGG
GTGTGA
 
Protein sequence
MLEEFKKFAL RGNVVDLAVG VIIGAAFGAI VNSLVQDVIM PIIGAVTGGL DFSNYYIPLS 
SKVQDGMPYA EAKKVGAVIG YGQFLTLAVN FTIIAFVLFM VIRAMNVLKS REEAKPKPVA
EVPADVKLLG EIRDLLAARR V