| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2552 |
|---|
| Symbol | |
|---|
| ID | 5831877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 2862958 |
|---|
| End bp | 2863734 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641368353 |
|---|
| Product | imidazole glycerol phosphate synthase subunit HisF |
|---|
| Protein accession | YP_001640017 |
|---|
| Protein GI | 163851974 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTCAAGA CCCGCATCAT CCCCTGCCTC GACGTGAAGG ACGGGCGCGT CGTGAAGGGC
GTGCAGTTCC TCGAGCTGCG CGATGCCGGT GATCCGGTGG AATCGGCCAA GGCCTACGAT
GCGGCCGGTG CCGACGAACT CTGCTTCCTC GACATCACCG CGAGCCACGA GGCGCGGGGC
ACCCTGCTCG ACGTGGTGAG CCGCACGGCG GAAGCCTGCT TCATGCCGCT CACCGTCGGT
GGCGGGGTGC GGACTGTGGC CGATGTGCGC ACGCTCCTGC TCGCGGGCGC CGACAAGGTC
GGCATCAACA CCGCCGCCGT GAAGAACCCC GACTTCGTCG CCGAGGCGGC GGAGAAGTTC
GGCGACCAGT GCATCGTCGT GGCGATCGAC GCCAAGCGGG TCTCCGGTCC GGACGAGGCC
GCGCGCTGGG AGATCTTCAC CCATGGCGGG CGCAACCCGA CCGGGATCGA CGCGGTCGAA
TTCGCCCGCA CGGTCTCCGA GCGGGGCGCG GGCGAACTCC TCGTCACCTC CATGGACAAG
GACGGCACCC GCTCCGGCTA CGACATCGCG CTCACCCGCG CCATCGCCGA TGCGGTGCGG
GTGCCGGTGA TCGCCTCCGG CGGCGTCGGC GGGCTCGACG ACCTCGTGGC GGGCGTCCGT
GACGGCGGCG CGAGCGCGGT GCTGGCCGCC TCGATCTTCC ATTTCGGCCA CCACACGGTC
GGCGAGGCCA AGGCCCATAT GGCCGCCGCC GGACTTGCGA TGCGACTCGA TCCGTAA
|
|---|
| Protein sequence | MLKTRIIPCL DVKDGRVVKG VQFLELRDAG DPVESAKAYD AAGADELCFL DITASHEARG
TLLDVVSRTA EACFMPLTVG GGVRTVADVR TLLLAGADKV GINTAAVKNP DFVAEAAEKF
GDQCIVVAID AKRVSGPDEA ARWEIFTHGG RNPTGIDAVE FARTVSERGA GELLVTSMDK
DGTRSGYDIA LTRAIADAVR VPVIASGGVG GLDDLVAGVR DGGASAVLAA SIFHFGHHTV
GEAKAHMAAA GLAMRLDP
|
|---|
| |