Gene Mext_2540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_2540 
Symbol 
ID5835568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp2852386 
End bp2853243 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content72% 
IMG OID641368341 
Productformyl transferase domain-containing protein 
Protein accessionYP_001640005 
Protein GI163851962 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.05523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCCC TCCGGATCGG CCTGTTCGCG CTGGAGGCGC TGCCGAACGC CCGCGCCGTC 
CGTCGCTTCG TGGCGGATCA CGCGGCGGCG ATCGCCTTCG TCGGCCTCTC CAACGCCGAG
CGGCCGGCGA CCGGCGGACT CGTCGGTCAG GTCCGGCGGC ATCTCGCCCG GTCCGGCCCC
GGCTTCCTGC CCTATCTCGG CGTCAATTTC GGGCTGCCGG ACCTGCTGCG TCCGCTCGCG
CCCCTGACCC AGCGCCTCGC CGGCAGTCGC GAGACGCCCG AGGCGACGCC GCTCGCCGCT
TTGTGTCACC AACTCGGAAT TCCGACACTG CGGGTCGATG ATGTGAATGG CGACGAGGTG
GCCCAGGCCT TCGCGGCCCA CGCACCCGAC CTGATCGTCA CCTTTCACTT CGACCAGATT
CTGTCCGCGG CGACGCTCGC GCGTGCGCGG CTCGGCGGGA TCAACCTCCA CCCGAGCCTG
CTGCCGCTCC ATCGCGGCCC CGTGCCGACG ATTCACGTGC TGGCGGACGG GAAGGGGGCG
TTCGGCGTCA CCATCCATCG CCTCGCGCCC GCGATCGATG CCGGGGCGAT CCTGGCTCAG
GAAGCGGTCG CGCTACCCGA CGGCACCACA GCCACGCGCG CCGCCGTGCG CTTGCACGAG
CACGGTCGCC TCCTGGTCGA TCGCGTGCTC AGCGAGATCG CCGCCGAGGG GACGATTCCG
GCGGGTCGAA CCGTTCCGGT GCTGCCCTAT CGCGGCTTTC CCGACCGGGC GCTGCTGGCG
CGGATGCGCC GCGACGGCCG GCTCCTCACC GACGGGCAGG ACTTACGGGA CGCGCTGACG
CTGTCCCGCA AGGGGTGA
 
Protein sequence
MPPLRIGLFA LEALPNARAV RRFVADHAAA IAFVGLSNAE RPATGGLVGQ VRRHLARSGP 
GFLPYLGVNF GLPDLLRPLA PLTQRLAGSR ETPEATPLAA LCHQLGIPTL RVDDVNGDEV
AQAFAAHAPD LIVTFHFDQI LSAATLARAR LGGINLHPSL LPLHRGPVPT IHVLADGKGA
FGVTIHRLAP AIDAGAILAQ EAVALPDGTT ATRAAVRLHE HGRLLVDRVL SEIAAEGTIP
AGRTVPVLPY RGFPDRALLA RMRRDGRLLT DGQDLRDALT LSRKG