Gene Mext_2539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_2539 
Symbol 
ID5835567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp2851559 
End bp2852386 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content72% 
IMG OID641368340 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001640004 
Protein GI163851961 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0247795 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCGCCG GCCTTCGACA CGGTCACGAC CCGGCTCCTC AGCGGAAAGA CCTCCTCTCC 
TTGCCCGTCA TCCTGATTAC CGGCGCCTCA AGCGGCATCG GCGCAGCCCT CGCGCGCTTC
TACGCCGGGA CCGGTGCGAG CCTCGTGCTC ACGGGCCGCG ACCGGGAACG GCTGGAGGCG
GTAGCGCAGG CGTGCCGGAC GCGCGGGGCC GCGGTGCTGA CGCGGCTGAT CGACGTGCGC
GAGCGGGAGG CGGTCGGCGC CTGGATTCGT GAGACCGACG CGGCGACACC GCTCGATCTC
ATCATCGTCA ATGCCGCGGT GAACGGCGGG CACCCGTCCG GCGGCCTGGA GACCGAGGCG
ACGGCCTTCG AGACGGCGGA CATCAATCTC ACCGGCGCGC TCAACGTGAT GCTGCCCTGC
GTGACCCTGA TGAGCGGGCG CGGCCGGGGG CAGATCGCGC TGATCTCCTC GCTGGCCGCC
TACGCGCCGC TGCCCGACGC CCCGGCCTAT AGCGGCGCCA AGGCGGCGCT CCTCGCTCAC
GGCCTTGCGC TCCGCCAGAA GCTGAAGCCG CTCGGCGTGC GCCTCAGCGT GGTGACGCCG
GGCTACGTCA AGACGCCGAT GGGTGGTGTC ATCAAGGGCT GGCGCCCCCT GGAAATGTCG
GCGGACGAGG CCGCCGCCCG CATCGCCCGA GGGCTGGAGC GCGACCTCGA CGTCATCGCT
TTCCCGGCGA TCCTCGCCGC GCTCGCCCGT GGTGCGCTGT TGGTGCCCGA ATGGCTGCGC
AGCGCGGGTC TCAGCGGTTT TCGCTTCCGC AACCGGCCGC GGCGCTGA
 
Protein sequence
MTAGLRHGHD PAPQRKDLLS LPVILITGAS SGIGAALARF YAGTGASLVL TGRDRERLEA 
VAQACRTRGA AVLTRLIDVR EREAVGAWIR ETDAATPLDL IIVNAAVNGG HPSGGLETEA
TAFETADINL TGALNVMLPC VTLMSGRGRG QIALISSLAA YAPLPDAPAY SGAKAALLAH
GLALRQKLKP LGVRLSVVTP GYVKTPMGGV IKGWRPLEMS ADEAAARIAR GLERDLDVIA
FPAILAALAR GALLVPEWLR SAGLSGFRFR NRPRR