Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_2539 |
Symbol | |
ID | 5835567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 2851559 |
End bp | 2852386 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641368340 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001640004 |
Protein GI | 163851961 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0247795 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACCGCCG GCCTTCGACA CGGTCACGAC CCGGCTCCTC AGCGGAAAGA CCTCCTCTCC TTGCCCGTCA TCCTGATTAC CGGCGCCTCA AGCGGCATCG GCGCAGCCCT CGCGCGCTTC TACGCCGGGA CCGGTGCGAG CCTCGTGCTC ACGGGCCGCG ACCGGGAACG GCTGGAGGCG GTAGCGCAGG CGTGCCGGAC GCGCGGGGCC GCGGTGCTGA CGCGGCTGAT CGACGTGCGC GAGCGGGAGG CGGTCGGCGC CTGGATTCGT GAGACCGACG CGGCGACACC GCTCGATCTC ATCATCGTCA ATGCCGCGGT GAACGGCGGG CACCCGTCCG GCGGCCTGGA GACCGAGGCG ACGGCCTTCG AGACGGCGGA CATCAATCTC ACCGGCGCGC TCAACGTGAT GCTGCCCTGC GTGACCCTGA TGAGCGGGCG CGGCCGGGGG CAGATCGCGC TGATCTCCTC GCTGGCCGCC TACGCGCCGC TGCCCGACGC CCCGGCCTAT AGCGGCGCCA AGGCGGCGCT CCTCGCTCAC GGCCTTGCGC TCCGCCAGAA GCTGAAGCCG CTCGGCGTGC GCCTCAGCGT GGTGACGCCG GGCTACGTCA AGACGCCGAT GGGTGGTGTC ATCAAGGGCT GGCGCCCCCT GGAAATGTCG GCGGACGAGG CCGCCGCCCG CATCGCCCGA GGGCTGGAGC GCGACCTCGA CGTCATCGCT TTCCCGGCGA TCCTCGCCGC GCTCGCCCGT GGTGCGCTGT TGGTGCCCGA ATGGCTGCGC AGCGCGGGTC TCAGCGGTTT TCGCTTCCGC AACCGGCCGC GGCGCTGA
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Protein sequence | MTAGLRHGHD PAPQRKDLLS LPVILITGAS SGIGAALARF YAGTGASLVL TGRDRERLEA VAQACRTRGA AVLTRLIDVR EREAVGAWIR ETDAATPLDL IIVNAAVNGG HPSGGLETEA TAFETADINL TGALNVMLPC VTLMSGRGRG QIALISSLAA YAPLPDAPAY SGAKAALLAH GLALRQKLKP LGVRLSVVTP GYVKTPMGGV IKGWRPLEMS ADEAAARIAR GLERDLDVIA FPAILAALAR GALLVPEWLR SAGLSGFRFR NRPRR
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