| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2537 |
|---|
| Symbol | |
|---|
| ID | 5833221 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 2847943 |
|---|
| End bp | 2849892 |
|---|
| Gene Length | 1950 bp |
|---|
| Protein Length | 649 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641368338 |
|---|
| Product | capsule polysaccharide biosynthesis protein |
|---|
| Protein accession | YP_001640002 |
|---|
| Protein GI | 163851959 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3563] Capsule polysaccharide export protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACC TGCGCCCCAT CGAGCCGCGA GGCGATACCG GGCTGCCCCG CACCTACCTG
CCGCTCGGCC GGACGGTCCG GCTTCTGCGC GCGCAGATCG AGGCGGCAAC GGGCGCGTCG
CTGACCTTCC GCTCCCCCGG CCCGCCGGCC CTGTGGTCCG CGACGGCAGC CGACGGCAAG
TCGGTTCTGC GGGTCGCGCC GGGCCCGCTC CTCAGCCCCT ACGATTCGCC GGAGACCGGC
CTTTCGAGCC TTAGCCTCAG CTATGCCGGC CGGCCCCTCG GAGGCGAGCC CCCTTCCCCG
GATTTCGGCG ACCTTCTGCG CGCACGCGGC CTCGCCGGCT ACAACCGCTT CGCCCGCTCG
CTTCCGGATG GAGCGGCCGA ACTCTTCTCA GGACAGACGC GGCCTGCCCT CGCCCTGATC
GATCCGCAAA CCGCCGCGTC CGGCGCGGTC CTGCGAAGCT TCCTGACGCG GCTTCTCGCC
GAGAATCCGG GGACGCGCTT CGTCGCCGCC GGCCCCGACG GATGCCCGCG TGATGGCGCG
CCGACCGATC CGCGGCTCAC CCTGATCGCG GGCCCGGCCG ATCCGTGGCT GCTGTTTCCC
CTCGCGGCGC GCATCCATGT GGCGCGATGG GACGCGGCCT GCGAGGCGGC GCTGGCCAGC
TTCGAGACCT ATTGCCCCGA CCCTGCAGCG GGTCCGCGCC CGGCGGATGC GGCGGCGTTC
CTGGCGCTCC GTTACGGCAT CGGCGTGCAC GGCTTCGATC CGTGGACGCG CCGGCCGATC
CCGCTCGCGG ATGCGGTGGA GCGCGTGGCG TGGCTGCGCG ACCGCTTCCT CGGCAACGAC
CGCCGCGTCG TCCTCGTCGG CGTGTCCGGC TGGAAGCGCG CCGCGCTCGA TGTCTTCGCC
ACCGGGCCGG CGGGACCGCC ACTCCACACC ATGATCGCGG ACGAGGCGGT GGCGCTCGCT
CGCGCGCAGG GCGGCCGGGT TCAGGCCTGG GCGACCCGCT GCCCGGAGCA GCTCCCGCGT
CTCTGCGCGG AGGCCGGCTT GCCCTTCGCG CGGATCGAGG ACGGATTCCT GCGCTCGGTC
GGGCTCGGCG CTAGCCTGGA GCCGGGCGCC TCCATCGTCG TGGACGATCT CGGCATCTAC
TACGACCCGC GGGTGGAGAG CCGGCTGGCC CGCACGCTGA AGGAAGCCGA GTTCCCGCCC
GGACTGACCG CCCGCGCCGC CGCCTTGCGC GAATCGATCG TGGCGCGGCG CCTGAGCAAG
TACAATGTCG GCCTCGAAGG CGTCGGCGAG GACTGGCCGA CGGACCGGCG GATCGTGCTG
GTGCCGGGCC AAGTCGAGGA CGACGCCTCG GTGCTGACCG GATCGCCGCA GGTGCGCGGC
AACCTCGCCC TGCTGCGGGC CGCCCGCGCC CGCAACCCGG ACGCCTTCCT GCTCTACAAG
CCGCATCCCG ACGTCGAGGC CGGGTTCCGT CCCGGTGCGA TCCCGGAGGA GGAGGTGCGG
CGGCTCGCCG ACCGTGTCGT CGGCGGCCTC TCCATCGTCG ACCTGCTCGA CCGTTGCCAC
CATGTCGAGA CCATGACCTC GCTGGCAGGC TTCGAGGCGC TGATCCGGGG GCTGAGCGTC
GCCGTCCACG GCCGCCCCTT TTATGCCGGC TGGGGGCTGA CCGAGGATCT GGCACCGGGG
GCCGACCGCG GTCGCACGCT GTCCCTCGAC GCCCTGGTGG CGGGTGCGCT GATCCTCTAC
CCGCTCTATC TCGATCCGGT GGCGATGAAG CCGTGCACGC CCGAGCAACT GCTCGACCGG
CTCAGCGAGG CCCGTGCGGC CGCGCCGCCC TCGCGTCTCG CCCTCGGCGC GGTCCGTCAC
GCGGCGATGC GGCTGCGCTA CGCCCTGATC AATCCGGTCA TCCGCCGCCT ACGCGCTCGC
CGCGGCGTGC GCAGTGAATC CGGCCGCTGA
|
|---|
| Protein sequence | MTDLRPIEPR GDTGLPRTYL PLGRTVRLLR AQIEAATGAS LTFRSPGPPA LWSATAADGK
SVLRVAPGPL LSPYDSPETG LSSLSLSYAG RPLGGEPPSP DFGDLLRARG LAGYNRFARS
LPDGAAELFS GQTRPALALI DPQTAASGAV LRSFLTRLLA ENPGTRFVAA GPDGCPRDGA
PTDPRLTLIA GPADPWLLFP LAARIHVARW DAACEAALAS FETYCPDPAA GPRPADAAAF
LALRYGIGVH GFDPWTRRPI PLADAVERVA WLRDRFLGND RRVVLVGVSG WKRAALDVFA
TGPAGPPLHT MIADEAVALA RAQGGRVQAW ATRCPEQLPR LCAEAGLPFA RIEDGFLRSV
GLGASLEPGA SIVVDDLGIY YDPRVESRLA RTLKEAEFPP GLTARAAALR ESIVARRLSK
YNVGLEGVGE DWPTDRRIVL VPGQVEDDAS VLTGSPQVRG NLALLRAARA RNPDAFLLYK
PHPDVEAGFR PGAIPEEEVR RLADRVVGGL SIVDLLDRCH HVETMTSLAG FEALIRGLSV
AVHGRPFYAG WGLTEDLAPG ADRGRTLSLD ALVAGALILY PLYLDPVAMK PCTPEQLLDR
LSEARAAAPP SRLALGAVRH AAMRLRYALI NPVIRRLRAR RGVRSESGR
|
|---|
| |