Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_2534 |
Symbol | |
ID | 5831549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 2843654 |
End bp | 2844778 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641368335 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_001639999 |
Protein GI | 163851956 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGTCC GACGCCCCCT CGCCCTCGGT TCGGCCTCGC TCGCGCTGCT GGTCGGACTC CTGCTCTCGG CTGTTCCGGC GATGGCGGAG GTCAAGGTCG GCGTCGCGGT GCCGCGCACC GGCCCCTACG TCACCGTCGG CGCGCAGGTG CTGCGCGGCG TCGAGGCGGC GGCGCGGGAC GCCAATGCGA AGGGCGGTAT CAACGGCGAG CCCATCGTGC TCGACGTGCA GGACGATTCC TGCGATTCGA ATCAGGCCGT GGCGGTGGCC AACCACTACG TGAACACGGG CGTGCGGCTC GTCGTCGGCC ATGTCTGCTC GAATGCGTCG CTCGCGGCCT CCGATGTCTA CGCCGCCAAC GGAATCGTGA TGATCACCGC GGCCTCGGTC GCCGCCAAGC TGACCGACCG CGGTTTACCG ACGATCTTCC GGGTCTGCGG CCGGGACGAC GACCAGGCCA AGCTCTCGGC CGCGATCCTC GCCGAGCGGT TCCGCGACCG GCGGATCGCC ATCCTCAACG ACCTCTCGCC GGCCTCGCGC ACCCTCGCAG CGGCGACCAA GGACAACCTC AACCGTATCG GCGTCAACGA AGCGATGGCG GCGGCCTTCC AGCCGAGCGA TGCCGACGAC GTGGCCCTCG CCGACCGGTT GAAGGCGGCG AATATCGACG TGGTCTATTA CGGCGGCGAC GCGCAGGAGA TGGGCCGGCT GGTCCGCATC GCGGCCGAAC GGGGCTTTCG CCCGCAATGG TTCGGCACCT CGGCCATCGC CACGCCGGAC TTCGCCAAGA TCGCAGGACC CGCCAGCAAC GGCGTGCTGA TGACCTTCTA TCTCGATCCG AGCCGCAAGC CGGAGGCGCA GGGCGTGGTA GCCGAGTTCA AGGCGCAAGG CGTCGAGGCG GACGGCTCGA TGATCTACGG CTATGCCGCG CTTCAGGCCC TGGTAGAGGC CGGCAACTTC GCCCACAGCA CGGAGCCTGC GGCGATCGCC AAGGCCCTGC ACGGCGAGCG CTTCGATCTG GTCCTCGGCC CCGTCGGCTT CGACGTCAAG GGCGACATCA CCGCCCAGGG CTACGTGCTC TACGTCTGGC GCGACGGCAA CTTCACGCCG GCCAAATCGA ACTGA
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Protein sequence | MTVRRPLALG SASLALLVGL LLSAVPAMAE VKVGVAVPRT GPYVTVGAQV LRGVEAAARD ANAKGGINGE PIVLDVQDDS CDSNQAVAVA NHYVNTGVRL VVGHVCSNAS LAASDVYAAN GIVMITAASV AAKLTDRGLP TIFRVCGRDD DQAKLSAAIL AERFRDRRIA ILNDLSPASR TLAAATKDNL NRIGVNEAMA AAFQPSDADD VALADRLKAA NIDVVYYGGD AQEMGRLVRI AAERGFRPQW FGTSAIATPD FAKIAGPASN GVLMTFYLDP SRKPEAQGVV AEFKAQGVEA DGSMIYGYAA LQALVEAGNF AHSTEPAAIA KALHGERFDL VLGPVGFDVK GDITAQGYVL YVWRDGNFTP AKSN
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