Gene Mext_2529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_2529 
Symbol 
ID5831391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp2837989 
End bp2838951 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content72% 
IMG OID641368330 
Productpolyprenyl synthetase 
Protein accessionYP_001639994 
Protein GI163851951 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCAA CGCAGGCTTC CCACCCCTCG GTCAAGGCGG ACGCCTATAC GGGTGACTTT 
ACCCACAGGC TCGCTCAGGT CGCCGACACC GTCGAGACCT TCCTCGTCGA TCTGCTCGGG
CCGACACTCC AGGCCGGCGA GATCGCCCGC CCGCCCCGGC TGATGGAGGC GATGCGCCAC
GCCGTGCTCG GCGGCGGCAA GCGGCTGCGG CCTTTCCTCG CCATCGAGAC CGCGCGGATG
CTCGGCGGGG CCGAGGATGC GGCGCTCGCG GCGGGTGCCG GCGTCGAACT CGTCCACTGC
TACAGCCTCG TTCACGACGA CCTGCCGGCC ATGGACGACG ACGATCTGCG CCGCGGCAAG
CCCACCGTCC ACAAGGCCTA TGACGAGGCC ACCGCGATCC TCGTCGGCGA CGCGCTCCAG
ACGCTGGCCT TCGAGGTCAC CGCCGATCCG CGCTGGCAGC CCGATCCGGC GATCCGGGCC
GAACTGGTGC TCGGGCTTGC CCGCGCCTCC GGCCTCGGCG GCATGGTCGG CGGCCAGCTC
CTCGACCTCT CGGCCGAGGG ACGCTTCGGC CCGGCCACCA TGGATATCGA CGACACCCTG
CGGATGCAGG CGATGAAGAC CGGGGCGATC CTCGCCTTCT CCGTCGAAGC CGGCGCTCTC
GTCGGCGGCG CGAACGCGGA CGAGCGGGCG GCGCTGCTGC GCTACGGCAA GGCGCTCGGC
CAAGCCTTCC AGGTCGCCGA CGACATTCTG GACCGCGAGG CCTCGCCGGA AGCGATGGGC
AAGGCCACCG GCAAGGACAA GGATGCCGGC AAGGCGACGC TGGTCGATCG CCTCGGCCTC
GACGGCGCGC GGGCCGAGTG CGACCGGCTG GTGGCGTTGT GCGAGGAAGC CGTCGCTCCC
TGGGGCGACC GGGCGCAGGT GCTCAAGGAC GCGGCCCGCT TCACCGTAGC CCGCAAGGCC
TGA
 
Protein sequence
MTSTQASHPS VKADAYTGDF THRLAQVADT VETFLVDLLG PTLQAGEIAR PPRLMEAMRH 
AVLGGGKRLR PFLAIETARM LGGAEDAALA AGAGVELVHC YSLVHDDLPA MDDDDLRRGK
PTVHKAYDEA TAILVGDALQ TLAFEVTADP RWQPDPAIRA ELVLGLARAS GLGGMVGGQL
LDLSAEGRFG PATMDIDDTL RMQAMKTGAI LAFSVEAGAL VGGANADERA ALLRYGKALG
QAFQVADDIL DREASPEAMG KATGKDKDAG KATLVDRLGL DGARAECDRL VALCEEAVAP
WGDRAQVLKD AARFTVARKA