| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2514 |
|---|
| Symbol | |
|---|
| ID | 5833365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 2814846 |
|---|
| End bp | 2817077 |
|---|
| Gene Length | 2232 bp |
|---|
| Protein Length | 743 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641368316 |
|---|
| Product | glycoside hydrolase family 3 protein |
|---|
| Protein accession | YP_001639980 |
|---|
| Protein GI | 163851937 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.0628734 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACGGC TGGCTCGGTG GATCATCCGC GGTGCCGCAG CCTGGGCCGT CGTCCTCGGC
GCTCCGGCCA GCGCCGTGGA GCCGGTCGAG AGCCGGATCG AGGCGCTGCT CGCCCGGATG
ACGCTGGAGG AGAAGGCGGG CCAGCTCAAC CTGATCTCGC ATGAGCCGTT CCTCGATCTC
GACAGCTTCC GCCGCGGCGA GGTCGGGGCG GTCATCAACT TCAACAATGC CGGCCTCGTG
GCGCAGGCCG ACCGGCTCGC CCGCGCGTCG CGGCTCGGTA TCCCGCTCCT CGTCGGCCTC
GACATCGTTC ACGGCTATCG CACCATCTTC CCGCTGCCGC TCGCCATGGC CGCGAGCTTC
GATGCCGGAC TCGTGCGCCG TGCCGCCGCC GCCCAGGCTC GCGAATCGGC GATGGTCGGC
CTCAACTGGA CCTTCTCGCC AATGGCGGAT GTCGCCCGCG ATCTGCGCTG GGGCCGGGTG
GTCGAGGGCT TGGGCGAAGA CCCGTGGCTG ACGGGGCGGC TCACCGCCGC GCAGGTCGAG
GGCTTTCGCG ATGGTGAGCT CGCGAGCACG CTCAAGCATT TCGCGGGCTA CAGCGCCGTG
CTCGGCGGGC GCGATTACGA CGCCACCTTC GTCGCGCCGA CCGAATTGCA CGACCTCCAC
CTGCCGCCGT TCCGTGACGG CATCCGGGCC GGCGCCGACG CGGTGATGAC GGCTTTGACC
GCCCTGAACG GCCTGCCCAC CACCGCCGAC CCGGCGCTGA TGACGGGCCT GCTGCGGCGG
CAGATGGGCT TTTCTGGCCT CGTCGTGGCC GATTGGCAGG CGATCGCCAG CCTGATGAAG
CACGGCGTCG CCCGCGATGG CGCGGAGGCC GCGCGCAAGG CGCTGGCGGC GGGCGTCGAC
ATGGACATGA CTAGCGGGCT GTTTCTCCGC CATCTGCCCG AGGAGGTGCG CGCTGGGCGC
GTTCCCGAAG GCGCGGTCGA TGCGGCGGTG CGCCGGGTGC TGCGGCTCAA ATTCGGGCTC
GGCCTGTTCG ACCGCCCCGT GGTCGATCCG GACGGCGCGG AGGAGAAACT TCTGCGCCCC
GAGACCCGGC GGCTCGCCCG CGAGGCGGCG CGAGCAAGCC TCGTCCTGCT GCAGAATCGC
GAGGATCTGC TGCCGATCGA TCCGGCCAAG GTGCGCCGCA TCGCCGTGGT CGGTCCCTTC
GCCGATTCCG CCTGGGATCA GGTCGGGCCG CATGAGGGCA CGGGGCAGGA ATGGGACGCG
GTGACGATCC TGGCGGGGCT GCGCGAGCGC GCCGCCGCCG CCGGTGTCGC GATCGATTTC
GCGCCGGGCT GTTCGCGTGT CTGCGACAGT CGCGCGGGTT TTGCCGCCGC GATCGAGGCG
GCGGCGGGCG CCGACCTCGT CGTGGCGGTG ATGGGCGAGC CGCGGGACCG TTCCGGCGAG
GGCTCATCGA GCGCCACCCT CTCCTGGCCC GGCCTGCAAC ATGATCTGCT CGCGGCGGTC
GCCGAGGCCG GCAAGCCTGT TGCGCTCGTC GTGGTCGGCG GGCGCCCGAC CGAACTCGGG
GATGCGTTAG GACAGGCGCA GGCGGTGCTG ATGGCGTGGC TTCCGGGCAC CGAGGGCGGG
CCGGCCGTGG CCGAGACGCT GTTCGGGGAC GCCAACCCGT CGGGCCGGCT GCCGGTTTCC
TGGCCGCGCA GGGTCGGGCA ATTGCCGCTG ACCTACGACA CGCTGCCGGG CGGGCGCCCG
CATATCCCGG GCACGCGCTG GACCATGGGC TATGCCGACG AATCGCCGCT GCCGCTGTTC
CCGTTCGGCT ACGGCCTCTC CTACACCCGC TTCGCCTATG GCGAGCCGGA GATCGTGACG
CCGCATGTCG GCGTCGGGGA CCGCTACGAC GCGATGCTGG AGGTGCGCGC CTCCGTCACC
AACCATGGGA CGCGTCCGGG CCGGGCGGTG GCGCAGCTCT ATGTCGGCCA ACCGGTCGCG
AGTCGCAGTC GGCCGAGGCG CCTGCTGAAG GGCGTCGCGC TTCTCGACCT CGCCTCGGGC
GAGACCGGGG TCGCGAGCTT CCGCGTGCCG GCGCGCGACC TCGGCTACCA CGAGCCGGAC
GGTACGCTGG TGGTGGAGGC CGGCACCTAC CTCGCCCATG TCGGCGGTGA TTCCCTCGCC
ACCCGCAGCG CCGGCTTCAC CGTCGAGACC GGCTGGCGCG GCCCGCCGGG CAGCGACGAG
GCGCGCCGCT GA
|
|---|
| Protein sequence | MRRLARWIIR GAAAWAVVLG APASAVEPVE SRIEALLARM TLEEKAGQLN LISHEPFLDL
DSFRRGEVGA VINFNNAGLV AQADRLARAS RLGIPLLVGL DIVHGYRTIF PLPLAMAASF
DAGLVRRAAA AQARESAMVG LNWTFSPMAD VARDLRWGRV VEGLGEDPWL TGRLTAAQVE
GFRDGELAST LKHFAGYSAV LGGRDYDATF VAPTELHDLH LPPFRDGIRA GADAVMTALT
ALNGLPTTAD PALMTGLLRR QMGFSGLVVA DWQAIASLMK HGVARDGAEA ARKALAAGVD
MDMTSGLFLR HLPEEVRAGR VPEGAVDAAV RRVLRLKFGL GLFDRPVVDP DGAEEKLLRP
ETRRLAREAA RASLVLLQNR EDLLPIDPAK VRRIAVVGPF ADSAWDQVGP HEGTGQEWDA
VTILAGLRER AAAAGVAIDF APGCSRVCDS RAGFAAAIEA AAGADLVVAV MGEPRDRSGE
GSSSATLSWP GLQHDLLAAV AEAGKPVALV VVGGRPTELG DALGQAQAVL MAWLPGTEGG
PAVAETLFGD ANPSGRLPVS WPRRVGQLPL TYDTLPGGRP HIPGTRWTMG YADESPLPLF
PFGYGLSYTR FAYGEPEIVT PHVGVGDRYD AMLEVRASVT NHGTRPGRAV AQLYVGQPVA
SRSRPRRLLK GVALLDLASG ETGVASFRVP ARDLGYHEPD GTLVVEAGTY LAHVGGDSLA
TRSAGFTVET GWRGPPGSDE ARR
|
|---|
| |