Gene Mext_2499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_2499 
Symbol 
ID5832511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp2801183 
End bp2801911 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content70% 
IMG OID641368301 
ProductOstA family protein 
Protein accessionYP_001639965 
Protein GI163851922 
COG category[S] Function unknown 
COG ID[COG1934] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03002] lipopolysaccharide transport periplasmic protein LptA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0667889 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.241313 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCCGC GTCTCGGCCC GGCGCTTGCT GCCGGCCTCG CCCTTCTCCT GGCGCATTCC 
GCCGCCGCGG CTCCGGCCAA GGAAACGGTG AAGGAAAAGC CCGCCGCGCT CGGCACCGTC
GGCGGCGGCA AGGGGCCGAT CAAGATCGAC GCCGACCGGC TCGACGTGTT CGACAAGGAG
AACAAGGCGA TCTTCGCCGG CAACGTCGTG GCGGTGCAGG GCGAGAGCAC GATCCGCTGC
TCGGCGATGA CGGTCCATTA CAAGCGCGAC AAGGACAAGG ATCCGGCCAA GGACGCGGCG
AAGTCGGAGG CCGAGGCGGC CGAGGATGCC AAGGCCAAGG CGGCGCTCGG CGGCAACGGC
ATCCGCAAGG TCGAATGCGC CGGCCCCGTG ACCGTGGCGC AGAAGGACCA GATCGCCACC
GGCGACAATG CGGTGTTCGA TCAGGAGGCC AAGCGCATCG TGCTGACCGG CAACGTCGTG
CTCAGCCAGT GCCAGAACGT CACCCGCGGT TCGCGCCTCG TCTACGACAT GGCGAGCGGC
CGGGCCAACA TGGACCCTGT GGCCGGCGGA CGCGTCTCGG CGATGTTCGT GCCGGGCGAG
GCCGGGCAGG CCAAGGGCAG TCAGCCGAAG GGCTGCACGC AGCCGGCCAT CGCGGCCAAG
CCTGGTGCCA AGGGTGCCGA CAAGGGGGCC GAGAAACCAG CCGTGAAGAC GCGGGCGCAG
GCGAACTGA
 
Protein sequence
MMPRLGPALA AGLALLLAHS AAAAPAKETV KEKPAALGTV GGGKGPIKID ADRLDVFDKE 
NKAIFAGNVV AVQGESTIRC SAMTVHYKRD KDKDPAKDAA KSEAEAAEDA KAKAALGGNG
IRKVECAGPV TVAQKDQIAT GDNAVFDQEA KRIVLTGNVV LSQCQNVTRG SRLVYDMASG
RANMDPVAGG RVSAMFVPGE AGQAKGSQPK GCTQPAIAAK PGAKGADKGA EKPAVKTRAQ
AN