Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_2491 |
Symbol | |
ID | 5831181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 2793589 |
End bp | 2794908 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641368293 |
Product | major facilitator transporter |
Protein accession | YP_001639957 |
Protein GI | 163851914 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.6286 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTGGCG ACGCACTTCC CTCGATCGAT CCCGCGCCGC GTCAGCCCTC CCGGCGCGCA TTGCGCGGAC TCGACCTGCT CAACGTCACC CTAGCCGACG TGCGCGACGG CCTCGGCCCG TATCTCGCCA TCTATCTTCT GGCCGTGCGC GGGCCCGACC AGGGCTGGAA CGAGGCGACG ATCGGCCTCG TGATGACGAT CGCCGGCATT GCCGGATTGC TCGCCCAGAC GCCCGCGGGC GCCCTGATCG ACCGCACCAA CGCCAAGCGC AGCGTCGTCA TCGCCGCCGC GGTCGTCGTC ACGGTGAGTT GTCTCGTTCT GCCCTGGATC TCGAATTTCA CGCTGGTGGC CGCCACACAG GCGCTCGCCA GCATGGCGGG TTCGATCTTC GCGCCGGCGC TCACCGGCAT CACGCTGGGT ATCGTCGGCC CGAAGCTGTT CTCGAAGCGC ATCGGCCGCA ACGAGGGCTT CAACCATGCC GGCAACGCGG TCTCAGCGAT GCTGGCGGGC GGCTTGGCCT ATGCCTTCGG CCCGATCGTC GTGTTCTGGC TCATGGGCCT TCTCGCCGCC TGCTCGATCG CCGCGATGCT GATGGTGCCG GCCGAGGACA TCGACGACGA CCTCGCCCGC GGCCTCGACT GCGCCGAAGA CCAGACCTGC GAGCAGCCCT CGGGCCTGAG CCTGCTGCTG CGCAACCGCC ACCTGATGCT GTTCGCGCTC CTCTGCGCCG CGTTCCACCT CGCCAACGCG GCGATGCTGC CCTCGGTTGG CCAGTTGCTG ACCAAGGTCG TCGGCAAGGA CAACGCGACC TCGCTGATCG CGGTCTGCAT CGTCGCCGCG CAATGCGTGA TGGTACCGAT GGCGGTGCTG GTCGGCGCCA AGGCCGACAG CTTCGGCCGC AAGCCGATCT TCCTCGTCGC CTTCGGCGTG CTGGCCCTGC GCGGCGTGCT CTACACGTTC TCGGACAACC CGTTCTATCT CGTGGCGGTG CAGTGCCTCG ACGGCGTCGG CGCCGGCATC TACGGCGCGC TGTTCCCGAT CGTGGTCGCC GACCTCACCC GCGGCACCGG CCGGTTCAAC GTCGCACAGG GCGCGGTCGC GACGGCGCAG GGGCTCGGCG CGGCGCTGAG TGCAACGCTG GCCGGCGTGG TCATCGTCGG CGCCGGCTAC TCGGCGGCCT TCCTCGTGCT CGCGGCAATC GCGGCGGCCG GCTTCGCGCT CTACCTGTTG TTCATGCCCG AGACCTTTGC CTACGAGCCG CGCTCTACGG ACGTGCCGCC CAGAGCTCCG TCGACACCTC TGGGGGCGCC GGCCGAGTAG
|
Protein sequence | MRGDALPSID PAPRQPSRRA LRGLDLLNVT LADVRDGLGP YLAIYLLAVR GPDQGWNEAT IGLVMTIAGI AGLLAQTPAG ALIDRTNAKR SVVIAAAVVV TVSCLVLPWI SNFTLVAATQ ALASMAGSIF APALTGITLG IVGPKLFSKR IGRNEGFNHA GNAVSAMLAG GLAYAFGPIV VFWLMGLLAA CSIAAMLMVP AEDIDDDLAR GLDCAEDQTC EQPSGLSLLL RNRHLMLFAL LCAAFHLANA AMLPSVGQLL TKVVGKDNAT SLIAVCIVAA QCVMVPMAVL VGAKADSFGR KPIFLVAFGV LALRGVLYTF SDNPFYLVAV QCLDGVGAGI YGALFPIVVA DLTRGTGRFN VAQGAVATAQ GLGAALSATL AGVVIVGAGY SAAFLVLAAI AAAGFALYLL FMPETFAYEP RSTDVPPRAP STPLGAPAE
|
| |